Evidence map›Paper›PMID 34617598›Full record

ArticleThe EMBO journal2021

Ice2 promotes ER membrane biogenesis in yeast by inhibiting the conserved lipin phosphatase complex.

Dimitrios Papagiannidis, Peter W Bircham, Christian Lüchtenborg, Oliver Pajonk, Giulia Ruffini, Britta Brügger, Sebastian Schuck

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
3.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 55 citations in OpenAlex.

  1. Metabolic engineering ofaBIOTECH · 2026
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  10. Architecture and function of yeast phosphatidate phosphatase Pah1 domains/regions.Biochimica et biophysica acta. Molecular and cell biology of lipids · 2024
    Review
  11. Article
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  14. Different ER-plasma membrane tethers play opposing roles in autophagy of the cortical ER.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  15. Article
  16. Article
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  18. Article
  19. Concept of lipid droplet biogenesis.European journal of cell biology · 2023
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Dimitrios PapagiannidisCenter for Molecular Biology of Heidelberg University (ZMBH), DKFZ-ZMBH Alliance and Cell Networks Cluster of Excellence, Heidelberg, Germany.ORCID 0000-0001-5650-6949
Peter W BirchamCenter for Molecular Biology of Heidelberg University (ZMBH), DKFZ-ZMBH Alliance and Cell Networks Cluster of Excellence, Heidelberg, Germany.ORCID 0000-0002-2512-5059
Christian LüchtenborgHeidelberg University Biochemistry Center (BZH), Heidelberg, Germany.
Oliver PajonkCenter for Molecular Biology of Heidelberg University (ZMBH), DKFZ-ZMBH Alliance and Cell Networks Cluster of Excellence, Heidelberg, Germany.ORCID 0000-0002-0251-6890
Giulia RuffiniCenter for Molecular Biology of Heidelberg University (ZMBH), DKFZ-ZMBH Alliance and Cell Networks Cluster of Excellence, Heidelberg, Germany.ORCID 0000-0002-4242-3285
Britta BrüggerHeidelberg University Biochemistry Center (BZH), Heidelberg, Germany.
Sebastian SchuckCenter for Molecular Biology of Heidelberg University (ZMBH), DKFZ-ZMBH Alliance and Cell Networks Cluster of Excellence, Heidelberg, Germany.ORCID 0000-0002-6388-0661
Heidelberg University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cells dynamically adapt organelle size to current physiological demand. Organelle growth requires membrane biogenesis and therefore needs to be coordinated with lipid metabolism. The endoplasmic reticulum (ER) can undergo massive expansion, but the underlying regulatory mechanisms are largely unclear. Here, we describe a genetic screen for factors involved in ER membrane expansion in budding yeast and identify the ER transmembrane protein Ice2 as a strong hit. We show that Ice2 promotes ER membrane biogenesis by opposing the phosphatidic acid phosphatase Pah1, called lipin in metazoa. Specifically, Ice2 inhibits the conserved Nem1-Spo7 complex and thus suppresses the dephosphorylation and activation of Pah1. Furthermore, Ice2 cooperates with the transcriptional regulation of lipid synthesis genes and helps to maintain cell homeostasis during ER stress. These findings establish the control of the lipin phosphatase complex as an important mechanism for regulating ER membrane biogenesis.

Indexed as

Endoplasmic ReticulumEndoplasmic Reticulum StressGene Expression Regulation, FungalIntracellular MembranesLipid MetabolismMembrane ProteinsMultiprotein ComplexesNuclear ProteinsOrganic ChemicalsPhosphatidate PhosphatasePhosphorylationRepressor ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsUnfolded Protein ResponseIce2 protein, S cerevisiaelipineMembrane ProteinsMultiprotein ComplexesNem1 protein, S cerevisiaeNuclear ProteinsOPI1 protein, S cerevisiaeOrganic ChemicalsPAH1 protein, S cerevisiaePhosphatidate PhosphataseRepressor ProteinsSaccharomyces cerevisiae ProteinsSPO7 protein, S cerevisiaeendoplasmic reticulumlipid dropletslipinOpi1organelle biogenesis

Identifiers

PMID34617598
PMCPMC8591542
OpenAlexW3204092655

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.