Evidence map›Paper›PMID 34616371›Full record

ReviewFrontiers in microbiology2021

Spread of Mink SARS-CoV-2 Variants in Humans: A Model of Sarbecovirus Interspecies Evolution.

Christian A Devaux, Lucile Pinault, Jérémy Delerce, Didier Raoult, Anthony Levasseur, Roger Frutos

Open access · goldAbstract readReview
In one paragraph

Review in Frontiers in microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.7field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 45 citations in OpenAlex.

  1. Review
  2. Review
  3. A comparison of sampling and testing approaches for the surveillance of SARS-CoV-2 in farmed American mink.Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2023
    Article
  4. Review
  5. Review
  6. Review
  7. Future virology · 2023
    Article
  8. Article
  9. Article
  10. SARS-CoV-2 and natural infection in animals.Journal of medical virology · 2023
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Cats and SARS-CoV-2: A Scoping Review.Animals : an open access journal from MDPI · 2022
    Article
  19. There is no "origin" to SARS-CoV-2.Environmental research · 2022
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Christian A DevauxAix-Marseille Université, IRD, APHM, MEPHI, IHU-Méditerranée Infection, Marseille, France.
Lucile PinaultAix-Marseille Université, IRD, APHM, MEPHI, IHU-Méditerranée Infection, Marseille, France.
Jérémy DelerceAix-Marseille Université, IRD, APHM, MEPHI, IHU-Méditerranée Infection, Marseille, France.
Didier RaoultAix-Marseille Université, IRD, APHM, MEPHI, IHU-Méditerranée Infection, Marseille, France.
Anthony LevasseurAix-Marseille Université, IRD, APHM, MEPHI, IHU-Méditerranée Infection, Marseille, France.
Roger FrutosCirad, UMR 17, Intertryp, Montpellier, France.
Aix-Marseille Université · FRCentre de Coopération Internationale en Recherche Agronomique pour le Développement · FRCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The rapid spread of SARS-CoV-2 variants has quickly spanned doubts and the fear about their ability escape vaccine protection. Some of these variants initially identified in caged were also found in humans. The claim that these variants exhibited lower susceptibility to antibody neutralization led to the slaughter of 17 million minks in Denmark. SARS-CoV-2 prevalence tests led to the discovery of infected farmed minks worldwide. In this study, we revisit the issue of the circulation of SARS-CoV-2 variants in minks as a model of sarbecovirus interspecies evolution by: (1) comparing human and mink angiotensin I converting enzyme 2 (ACE2) and neuropilin 1 (NRP-1) receptors; (2) comparing SARS-CoV-2 sequences from humans and minks; (3) analyzing the impact of mutations on the 3D structure of the spike protein; and (4) predicting linear epitope targets for immune response. Mink-selected SARS-CoV-2 variants carrying the Y453F/D614G mutations display an increased affinity for human ACE2 and can escape neutralization by one monoclonal antibody. However, they are unlikely to lose most of the major epitopes predicted to be targets for neutralizing antibodies. We discuss the consequences of these results for the rational use of SARS-CoV-2 vaccines.

Indexed as

ACE2COVID-19COVID-19 vaccinesmink coronavirusNRP-1SARS-CoV-2variant viruses

Identifiers

PMID34616371
PMCPMC8488371
OpenAlexW3199903344

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.