Evidence map›Paper›PMID 34616071›Full record

ArticleNature2021

Cellular anatomy of the mouse primary motor cortex.

Rodrigo Muñoz-Castañeda, Brian Zingg, Katherine S Matho, Xiaoyin Chen, Quanxin Wang, Nicholas N Foster, Anan Li, Arun Narasimhan, Karla E Hirokawa, Bingxing Huo and 73 more

Open access · hybridAbstract read
In one paragraph

Article in Nature, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 164 papers.

0numbers the graph read from it
0cells of the map it votes in
164citing papers in PubMed
49.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

164 citing papers in PubMed, 271 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Concordant transcriptional and morphological remodeling revealed bybioRxiv : the preprint server for biology · 2026
    Article
  15. MAPseq2: a sensitive barcoded connectomics method.bioRxiv : the preprint server for biology · 2026
    Article
  16. Article
  17. Article
  18. Circuit Organization of the Forelimb-Related M2-to-M1 Corticocortical Pathway in the Mouse.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2026
    Article
  19. Integration of learned artificial sensation with vision during freely moving navigation.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  20. Article

104 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

83 authors at 13 institutions in 2 countries.

Rodrigo Muñoz-Castañeda *Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Brian Zingg *UCLA Brain Research and Artificial Intelligence Nexus, Department of Neurobiology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA.
Katherine S Matho *Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Xiaoyin Chen *Cold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.ORCID http://orcid.org/0000-0002-2807-6125
Quanxin Wang *Allen Institute for Brain Science, Seattle, WA, USA.
Nicholas N FosterUCLA Brain Research and Artificial Intelligence Nexus, Department of Neurobiology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA.ORCID http://orcid.org/0000-0003-1740-9788
Anan LiBritton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics, MoE Key Laboratory for Biomedical Photonics, Huazhong University of Science and Technology, Wuhan, China.ORCID http://orcid.org/0000-0002-5877-4813
Arun NarasimhanCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.ORCID http://orcid.org/0000-0002-0246-6301
Karla E HirokawaAllen Institute for Brain Science, Seattle, WA, USA.
Bingxing HuoCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.ORCID http://orcid.org/0000-0002-9389-2591
Samik BannerjeeCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.ORCID http://orcid.org/0000-0003-2325-1489
Laura KorobkovaUSC Stevens Neuroimaging and Informatics Institute (INI), Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, USA.
Chris Sin ParkCenter for Neurobehavioral Genetics, Jane and Terry Semel Institute for Neuroscience and Human Behavior, Department of Psychiatry and Biobehavioral Sciences, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.
Young-Gyun ParkInstitute for Medical Engineering and Science, Department of Chemical Engineering, Picower Institute for Learning and Memory, Massachusetts Institute of Technology (MIT), Cambridge, MA, USA.
Michael S BienkowskiUSC Stevens Neuroimaging and Informatics Institute (INI), Keck School of Medicine of USC, University of Southern California, Los Angeles, CA, USA.
Uree ChonDepartment of Neural and Behavioral Sciences, College of Medicine, Penn State University, Hershey, PA, USA.
Diek W WheelerCenter for Neural Informatics, Structures and Plasticity, Bioengineering Department and Krasnow Institute for Advanced Study, George Mason University, Fairfax, VA, USA.ORCID http://orcid.org/0000-0001-8635-0033
Xiangning LiBritton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics, MoE Key Laboratory for Biomedical Photonics, Huazhong University of Science and Technology, Wuhan, China.
Yun WangAllen Institute for Brain Science, Seattle, WA, USA.
Maitham NaeemiAllen Institute for Brain Science, Seattle, WA, USA.
Peng XieSEU-ALLEN Joint Center, Institute for Brain and Intelligence, Southeast University, Nanjing, China.
Lijuan LiuSEU-ALLEN Joint Center, Institute for Brain and Intelligence, Southeast University, Nanjing, China.
Kathleen KellyCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Xu AnCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Sarojini M AttiliCenter for Neural Informatics, Structures and Plasticity, Bioengineering Department and Krasnow Institute for Advanced Study, George Mason University, Fairfax, VA, USA.
Ian BowmanUCLA Brain Research and Artificial Intelligence Nexus, Department of Neurobiology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA.
Anastasiia BludovaCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Ali CetinAllen Institute for Brain Science, Seattle, WA, USA.
Liya DingSEU-ALLEN Joint Center, Institute for Brain and Intelligence, Southeast University, Nanjing, China.ORCID http://orcid.org/0000-0002-1209-875X
Rhonda DrewesCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Florence D'OraziAllen Institute for Brain Science, Seattle, WA, USA.
Corey ElowskyCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Stephan FischerCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.ORCID http://orcid.org/0000-0002-7034-4103
William GalbavyCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Lei GaoUCLA Brain Research and Artificial Intelligence Nexus, Department of Neurobiology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA.
Jesse GillisCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Peter A GroblewskiAllen Institute for Brain Science, Seattle, WA, USA.
Lin GouUCLA Brain Research and Artificial Intelligence Nexus, Department of Neurobiology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA.
Joel D HahnDepartment of Biological Sciences, University of Southern California, Los Angeles, CA, USA.ORCID http://orcid.org/0000-0003-4024-0247
Joshua T HatfieldCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Houri HintiryanUCLA Brain Research and Artificial Intelligence Nexus, Department of Neurobiology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA.ORCID http://orcid.org/0000-0002-9721-6785
Junxiang Jason HuangCenter for Neural Circuits and Sensory Processing Disorders, Zilkha Neurogenetics Institute (ZNI), Department of Physiology and Neuroscience, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.
Hideki KondoCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Xiuli KuangSchool of Optometry and Ophthalmology, Wenzhou Medical University, Wenzhou, China.
Philip LesnarAllen Institute for Brain Science, Seattle, WA, USA.
Xu LiCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Yaoyao LiSchool of Optometry and Ophthalmology, Wenzhou Medical University, Wenzhou, China.
Mengkuan LinCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Darrick LoUCLA Brain Research and Artificial Intelligence Nexus, Department of Neurobiology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA.ORCID http://orcid.org/0000-0002-5516-8607
Judith MizrachiCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Stephanie MokAllen Institute for Brain Science, Seattle, WA, USA.
Philip R NicovichAllen Institute for Brain Science, Seattle, WA, USA.
Ramesh PalaniswamyCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Jason PalmerCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Xiaoli QiCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Elise ShenAllen Institute for Brain Science, Seattle, WA, USA.
Yu-Chi SunCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Huizhong W TaoCenter for Neural Circuits and Sensory Processing Disorders, Zilkha Neurogenetics Institute (ZNI), Department of Physiology and Neuroscience, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.ORCID http://orcid.org/0000-0002-3660-0513
Wayne WakemenAllen Institute for Brain Science, Seattle, WA, USA.
Yimin WangSEU-ALLEN Joint Center, Institute for Brain and Intelligence, Southeast University, Nanjing, China.ORCID http://orcid.org/0000-0003-2515-6602
Shenqin YaoAllen Institute for Brain Science, Seattle, WA, USA.
Jing YuanBritton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics, MoE Key Laboratory for Biomedical Photonics, Huazhong University of Science and Technology, Wuhan, China.ORCID http://orcid.org/0000-0001-9050-4496
Huiqing ZhanCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.
Muye ZhuUCLA Brain Research and Artificial Intelligence Nexus, Department of Neurobiology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA.
Lydia NgAllen Institute for Brain Science, Seattle, WA, USA.
Li I ZhangCenter for Neural Circuits and Sensory Processing Disorders, Zilkha Neurogenetics Institute (ZNI), Department of Physiology and Neuroscience, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.ORCID http://orcid.org/0000-0003-0275-8651
Byung Kook LimHUST-Suzhou Institute for Brainsmatics, JITRI, Suzhou, China.ORCID http://orcid.org/0000-0002-3766-5415
Michael HawrylyczAllen Institute for Brain Science, Seattle, WA, USA.ORCID http://orcid.org/0000-0002-5741-8024
Hui GongBritton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics, MoE Key Laboratory for Biomedical Photonics, Huazhong University of Science and Technology, Wuhan, China.ORCID http://orcid.org/0000-0001-5519-6248
James C GeeDepartment of Radiology, University of Pennsylvania, Philadelphia, PA, USA.
Yongsoo KimDepartment of Neural and Behavioral Sciences, College of Medicine, Penn State University, Hershey, PA, USA.
Kwanghun ChungInstitute for Medical Engineering and Science, Department of Chemical Engineering, Picower Institute for Learning and Memory, Massachusetts Institute of Technology (MIT), Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-8167-3340
X William YangCenter for Neurobehavioral Genetics, Jane and Terry Semel Institute for Neuroscience and Human Behavior, Department of Psychiatry and Biobehavioral Sciences, David Geffen School of Medicine at UCLA, Los Angeles, CA, USA.ORCID http://orcid.org/0000-0003-3705-7935
Hanchuan PengSEU-ALLEN Joint Center, Institute for Brain and Intelligence, Southeast University, Nanjing, China.ORCID http://orcid.org/0000-0002-3478-3942
Qingming LuoBritton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics, MoE Key Laboratory for Biomedical Photonics, Huazhong University of Science and Technology, Wuhan, China.ORCID http://orcid.org/0000-0002-6725-9311
Partha P MitraCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.ORCID http://orcid.org/0000-0001-8818-6804
Anthony M ZadorCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA.ORCID http://orcid.org/0000-0002-8431-9136
Hongkui ZengAllen Institute for Brain Science, Seattle, WA, USA.ORCID http://orcid.org/0000-0002-0326-5878
Giorgio A AscoliCenter for Neural Informatics, Structures and Plasticity, Bioengineering Department and Krasnow Institute for Advanced Study, George Mason University, Fairfax, VA, USA. ascoli@gmu.edu.ORCID http://orcid.org/0000-0002-0964-676X
Z Josh HuangCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA. josh.huang@duke.edu.ORCID http://orcid.org/0000-0003-0592-028X
Pavel OstenCold Spring Harbor Laboratory, Cold Spring Harbor, NY, USA. osten@cshl.edu.ORCID http://orcid.org/0000-0002-6385-7541
Julie A HarrisAllen Institute for Brain Science, Seattle, WA, USA. jharris@cajalneuro.com.
Hong-Wei DongUCLA Brain Research and Artificial Intelligence Nexus, Department of Neurobiology, David Geffen School of Medicine, University of California Los Angeles, Los Angeles, CA, USA. HongWeiD@mednet.ucla.edu.ORCID http://orcid.org/0000-0001-9972-3177
Cold Spring Harbor Laboratory · USAllen Institute for Brain Science · USUniversity of Southern California · USSoutheast University · CNSuzhou Research Institute · CNDuke University · USGeorge Mason University · USMassachusetts Institute of Technology · USPennsylvania State University · USWenzhou Medical University · CNAllen Institute · USUniversity of Pennsylvania · USUniversity of San Diego · US

Funding

Generation of novel cell type specific mouse genetic toolsU19MH114830 · NIMH · ALLEN INSTITUTE · PI ANDERSON, DAVID J, PACHTER, LIOR S · 2017 to 2021
$64.7M
Tool and Technology Development CoreU19MH114821 · NIMH · COLD SPRING HARBOR LABORATORY · PI MITRA, PARTHA PRATIM · 2017 to 2021
$64.5M
Molecular SignaturesU19MH114831 · NIMH · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI CALLAWAY, EDWARD M · 2017 to 2021
$24.6M
Theory and Modeling of the Orofacial Active SensationU19NS107466 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GOLOMB, DAVID · 2018 to 2022
$14.9M
TR&D3: Intrinsic Surface MappingP41EB015922 · NIBIB · UNIVERSITY OF SOUTHERN CALIFORNIA · PI VAN HORN, JOHN DARRELL · 2012 to 2022
$14.1M
Anatomical characterization of neuronal cell types of the mouse brainU01MH114829 · NIMH · UNIVERSITY OF SOUTHERN CALIFORNIA · PI ASCOLI, GIORGIO A, DONG, HONG-WEI · 2017 to 2021
$13.9M
Cell atlas of mouse brain-spinal cord connectomeU01MH116990 · NIMH · UNIVERSITY OF SOUTHERN CALIFORNIA · PI DONG, HONG-WEI, TAO, HUIZHONG WHIT · 2018 to 2022
$12.0M
Collaboratory for atlasing cell type anatomy in the female and male mouse brainU01MH114824 · NIMH · COLD SPRING HARBOR LABORATORY · PI MITRA, PARTHA PRATIM · 2017 to 2021
$11.7M
Processing and transformation of visual signals in the superior colliculusR01EY019049 · NEI · UNIVERSITY OF SOUTHERN CALIFORNIA · PI TAO, HUIZHONG WHIT · 2008 to 2025
$9.2M
Thalamic Modulation of Auditory Cortical Processing via LPR01DC008983 · NIDCD · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Li I Zhang · 2007 to 2026
$8.7M
The Mouse Connectome Project Phase III: Assembling the global neural networks of the mouse brainR01MH094360 · NIMH · UNIVERSITY OF SOUTHERN CALIFORNIA · PI DONG, HONG-WEI · 2012 to 2021
$7.4M
Generation and Description of Neuronal Morphology and ConnectivityR01NS039600 · NINDS · GEORGE MASON UNIVERSITY · PI ASCOLI, GIORGIO A · 1999 to 2024
$6.9M
NEI NIH HHS R01 EY019049NEI NIH HHS R01 EY023173NIA NIH HHS RF1 AG064049NIBIB NIH HHS P41 EB015922NIBIB NIH HHS R01 EB022899NIDA NIH HHS R01 DA036913NIDCD NIH HHS R01 DC008983NIH HHS 5R01 DA036913NIH HHS 5R01 NS073129NIH HHS 5U19 MH114821-03NIH HHS EB022899NIH HHS EY019049NIH HHS MH114821NIH HHS MH114824NIH HHS NS107466NIH HHS RF1 MH12460501NIMH NIH HHS R01 MH094360NIMH NIH HHS R01 MH113005NIMH NIH HHS R01 MH116176NIMH NIH HHS RF1 MH114112NIMH NIH HHS RF1 MH114132NIMH NIH HHS RF1 MH124605NIMH NIH HHS U01 MH105982NIMH NIH HHS U01 MH106008NIMH NIH HHS U01 MH109113NIMH NIH HHS U01 MH114824NIMH NIH HHS U01 MH114829NIMH NIH HHS U01 MH116990NIMH NIH HHS U01 MH117079NIMH NIH HHS U19 MH114821NIMH NIH HHS U19 MH114830NIMH NIH HHS U19 MH114831NINDS NIH HHS R01 NS039600NINDS NIH HHS R01 NS073129NINDS NIH HHS R01 NS086082NINDS NIH HHS R01 NS096720NINDS NIH HHS U19 NS107466NLM NIH HHS R01 LM012736
6 · The paper itself

Abstract

An essential step toward understanding brain function is to establish a structural framework with cellular resolution on which multi-scale datasets spanning molecules, cells, circuits and systems can be integrated and interpreted

Indexed as

AnimalsAtlases as TopicFemaleGABAergic NeuronsGlutamatesMaleMiceMice, Inbred C57BLMotor CortexNeuroimagingNeuronsOrgan SpecificitySequence Analysis, RNASingle-Cell AnalysisGlutamates

Identifiers

PMID34616071
PMCPMC8494646
OpenAlexW3202762561

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.