Evidence map›Paper›PMID 34615874›Full record

ArticleNature communications2021

A chemical probe based on the PreQ

Sumirtha Balaratnam, Curran Rhodes, Desta Doro Bume, Colleen Connelly, Christopher C Lai, James A Kelley, Kamyar Yazdani, Philip J Homan, Danny Incarnato, Tomoyuki Numata and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Site-Selective Ligand Selection by Mutational Profiling for Covalent RNA Targeting.Angewandte Chemie (International ed. in English) · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Ligand-binding pockets in RNA and where to find them.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Synthesis of electrophile-tethered preQBeilstein journal of organic chemistry · 2025
    Article
  18. Review
  19. Article
  20. Heterobifunctional small molecules to modulate RNA function.Trends in pharmacological sciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Sumirtha Balaratnam *Chemical Biology Laboratory, National Cancer Institute, Frederick, MD, 21702, USA.
Curran Rhodes *Chemical Biology Laboratory, National Cancer Institute, Frederick, MD, 21702, USA.
Desta Doro BumeChemical Biology Laboratory, National Cancer Institute, Frederick, MD, 21702, USA.
Colleen ConnellyChemical Biology Laboratory, National Cancer Institute, Frederick, MD, 21702, USA.ORCID http://orcid.org/0000-0003-1671-3243
Christopher C LaiChemical Biology Laboratory, National Cancer Institute, Frederick, MD, 21702, USA.
James A KelleyChemical Biology Laboratory, National Cancer Institute, Frederick, MD, 21702, USA.
Kamyar YazdaniChemical Biology Laboratory, National Cancer Institute, Frederick, MD, 21702, USA.
Philip J HomanCenter for Cancer Research Collaborative Bioinformatics Resource, National Cancer Institute, National Institutes of Health, Bethesda, MD, 20892, USA.
Danny IncarnatoDepartment of Molecular Genetics, Groningen Biomolecular Sciences and Biotechnology Institute (GBB), University of Groningen, Groningen, The Netherlands.ORCID http://orcid.org/0000-0003-3944-2327
Tomoyuki NumataDepartment of Bioscience and Biotechnology, Graduate School of Bioresource and Bioenvironmental Sciences, Kyushu University, 744 Motooka, Nishi-ku, Fukuoka-shi, Fukuoka, 812-8582, Japan.
John S SchneeklothChemical Biology Laboratory, National Cancer Institute, Frederick, MD, 21702, USA. schneeklothjs@mail.nih.gov.ORCID http://orcid.org/0000-0001-7459-783X
National Cancer Institute · USKyushu University · JPNational Institutes of Health · USUniversity of Groningen · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The role of metabolite-responsive riboswitches in regulating gene expression in bacteria is well known and makes them useful systems for the study of RNA-small molecule interactions. Here, we study the PreQ

Indexed as

TranscriptomeBinding SitesCrystallography, X-RayHumansLigandsPyrimidinonesPyrrolesRiboswitchRNA, Bacterial7-(aminomethyl)-7-deazaguanineLigandsPyrimidinonesPyrrolesRiboswitchRNA, Bacterial

Identifiers

PMID34615874
PMCPMC8494917
OpenAlexW3203803275

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.