Evidence map›Paper›PMID 34613753›Full record

ArticleApplied and environmental microbiology2021

Identification of Copper-Containing Oxidoreductases in the Secretomes of Three

David Ribeaucourt, Safwan Saker, David Navarro, Bastien Bissaro, Elodie Drula, Lydie Oliveira Correia, Mireille Haon, Sacha Grisel, Nicolas Lapalu, Bernard Henrissat and 4 more

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 24 citations in OpenAlex.

  1. A time-course analysis ofApplied and environmental microbiology · 2024
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Enzymatic reactions towards aldehydes: An overview.Flavour and fragrance journal · 2023
    Review
  7. Article
  8. Review
  9. Article
  10. Tunable Production of (ACS catalysis · 2022
    Article
  11. A LignocellulolyticJournal of fungi (Basel, Switzerland) · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

David RibeaucourtINRAE, Aix Marseille Université, UMR1163 Biodiversité et Biotechnologie Fongiques, Marseille, France.ORCID 0000-0003-0927-1491
Safwan SakerINRAE, Aix Marseille Université, UMR1163 Biodiversité et Biotechnologie Fongiques, Marseille, France.
David NavarroINRAE, Aix Marseille Université, UMR1163 Biodiversité et Biotechnologie Fongiques, Marseille, France.
Bastien BissaroINRAE, Aix Marseille Université, UMR1163 Biodiversité et Biotechnologie Fongiques, Marseille, France.
Elodie DrulaINRAE, Aix Marseille Université, UMR1163 Biodiversité et Biotechnologie Fongiques, Marseille, France.
Lydie Oliveira CorreiaPlateforme d'Analyse Protéomique de Paris Sud-Ouest, INRAE, AgroParisTech, Université Paris-Saclay, Micalis Institute, Jouy-en-Josas, France.
Mireille HaonINRAE, Aix Marseille Université, UMR1163 Biodiversité et Biotechnologie Fongiques, Marseille, France.
Sacha GriselINRAE, Aix Marseille Université, UMR1163 Biodiversité et Biotechnologie Fongiques, Marseille, France.
Nicolas LapaluUMR BIOGER, Institut National de la Recherche Agronomique, AgroParisTech, Université Paris-Saclay, Versailles, France.
Bernard HenrissatINRAE, USC1408, AFMB, Marseille, France.
Richard J O'ConnellUMR BIOGER, Institut National de la Recherche Agronomique, AgroParisTech, Université Paris-Saclay, Versailles, France.
Fanny LambertV. Mane Fils, Le Bar sur Loup, France.
Mickaël LafondAix Marseille Université, CNRS, Marseille, France.ORCID 0000-0003-2646-0286
Jean-Guy BerrinINRAE, Aix Marseille Université, UMR1163 Biodiversité et Biotechnologie Fongiques, Marseille, France.ORCID 0000-0001-7570-3745
Aix-Marseille Université · FRCentre National de la Recherche Scientifique · FRAgroParisTech · FRMane (France) · FR

Funding

Agence Nationale de la Recherche (ANR) ANR-17-CAPS-0004-01Agence Nationale de la Recherche (ANR) ANR-17-CE07-0047Association Nationale de la Recherche et de la Technologie (ANRT) 2017/1169
6 · The paper itself

Abstract

Copper radical alcohol oxidases (CRO-AlcOx), which have been recently discovered among fungal phytopathogens, are attractive for the production of fragrant fatty aldehydes. With the initial objective to investigate the secretion of CRO-AlcOx by natural fungal strains, we undertook time course analyses of the secretomes of three Colletotrichum species (C. graminicola, C. tabacum, and C. destructivum) using proteomics. The addition of a copper-manganese-ethanol mixture in the absence of any plant-biomass mimicking compounds to Colletotrichum cultures unexpectedly induced the secretion of up to 400 proteins, 29 to 52% of which were carbohydrate-active enzymes (CAZymes), including a wide diversity of copper-containing oxidoreductases from the auxiliary activities (AA) class (AA1, AA3, AA5, AA7, AA9, AA11, AA12, AA13, and AA16). Under these specific conditions, while a CRO-glyoxal oxidase from the AA5_1 subfamily was among the most abundantly secreted proteins, the targeted AA5_2 CRO-AlcOx were secreted at lower levels, suggesting heterologous expression as a more promising strategy for CRO-AlcOx production and utilization. C. tabacum and C. destructivum CRO-AlcOx were thus expressed in Pichia pastoris, and their preference toward both aromatic and aliphatic primary alcohols was assessed. The CRO-AlcOx from C. destructivum was further investigated in applied settings, revealing a full conversion of C

Indexed as

ColletotrichumCopperAlcoholsAldehydesFatty AcidsFungal ProteinsOxidoreductasesSecretomeAlcoholsAldehydesCopperFatty Acidsfatty aldehydeFungal ProteinsOxidoreductasesalcohol oxidaseCAZymesColletotrichumcopper-containing enzymescopper radical oxidasefilamentous fungiflavors and fragrancesphytopathogensecretomics

Identifiers

PMID34613753
PMCPMC8612266
OpenAlexW3202524745

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.