Evidence map›Paper›PMID 34612695›Full record

ArticleMicrobiology spectrum2021

Influenza A H1N1 Induced Disturbance of the Respiratory and Fecal Microbiome of German Landrace Pigs - a Multi-Omics Characterization.

Laurin Christopher Gierse, Alexander Meene, Daniel Schultz, Theresa Schwaiger, Charlotte Schröder, Pierre Mücke, Daniela Zühlke, Tjorven Hinzke, Haitao Wang, Karen Methling and 7 more

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
3.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 43 citations in OpenAlex.

  1. Pooled it
  2. Microorganisms · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 3 institutions in 1 country.

Laurin Christopher GierseInstitute of Microbiology, University of Greifswaldgrid.5603.0, Greifswald, Germany.
Alexander MeeneInstitute of Microbiology, University of Greifswaldgrid.5603.0, Greifswald, Germany.
Daniel SchultzInstitute of Biochemistry, University of Greifswaldgrid.5603.0, Greifswald, Germany.
Theresa SchwaigerFriedrich-Loeffler-Institutgrid.417834.d, Greifswald-Insel Riems, Greifswald, Germany.
Charlotte SchröderFriedrich-Loeffler-Institutgrid.417834.d, Greifswald-Insel Riems, Greifswald, Germany.
Pierre MückeInstitute of Microbiology, University of Greifswaldgrid.5603.0, Greifswald, Germany.
Daniela ZühlkeInstitute of Microbiology, University of Greifswaldgrid.5603.0, Greifswald, Germany.
Tjorven HinzkeInstitute of Microbiology, University of Greifswaldgrid.5603.0, Greifswald, Germany.
Haitao WangInstitute of Microbiology, University of Greifswaldgrid.5603.0, Greifswald, Germany.
Karen MethlingInstitute of Biochemistry, University of Greifswaldgrid.5603.0, Greifswald, Germany.
Bernd KreikemeyerInstitute for Medical Microbiology, Virology and Hygiene, Rostock University Medical Centre, Rostock, Germany.ORCID 0000-0001-9527-5098
Jörg BernhardtInstitute of Microbiology, University of Greifswaldgrid.5603.0, Greifswald, Germany.
Dörte BecherInstitute of Microbiology, University of Greifswaldgrid.5603.0, Greifswald, Germany.
Thomas C MettenleiterFriedrich-Loeffler-Institutgrid.417834.d, Greifswald-Insel Riems, Greifswald, Germany.
Michael LalkInstitute of Biochemistry, University of Greifswaldgrid.5603.0, Greifswald, Germany.
Tim UrichInstitute of Microbiology, University of Greifswaldgrid.5603.0, Greifswald, Germany.
Katharina RiedelInstitute of Microbiology, University of Greifswaldgrid.5603.0, Greifswald, Germany.ORCID 0000-0002-4629-3019
Universität Greifswald · DEFriedrich-Loeffler-Institut · DEUniversity of Rostock · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Seasonal influenza outbreaks represent a large burden for the health care system as well as the economy. While the role of the microbiome has been elucidated in the context of various diseases, the impact of respiratory viral infections on the human microbiome is largely unknown. In this study, swine was used as an animal model to characterize the temporal dynamics of the respiratory and gastrointestinal microbiome in response to an influenza A virus (IAV) infection. A multi-omics approach was applied on fecal samples to identify alterations in microbiome composition and function during IAV infection. We observed significantly altered microbial richness and diversity in the gastrointestinal microbiome after IAV infection. In particular, increased abundances of

Indexed as

AnimalsBacteriaDisease Models, AnimalFatty Acids, VolatileFecesFemaleGastrointestinal MicrobiomeGene Expression ProfilingInfluenza A Virus, H1N1 SubtypeMaleOrthomyxoviridae InfectionsProteomicsRespiratory SystemRNA, Ribosomal, 16SSwineFatty Acids, VolatileRNA, Ribosomal, 16S16S rRNA gene sequencingbiomedical model swineinfluenza Ametabolomicsmetaproteomicsmicrobiomemulti-omics

Identifiers

PMID34612695
PMCPMC8510242
OpenAlexW3201792477

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.