Evidence map›Paper›PMID 34608730›Full record

ReviewEcology letters2021

Microbiome influence on host community dynamics: Conceptual integration of microbiome feedback with classical host-microbe theory.

Karen C Abbott, Maarten B Eppinga, James Umbanhowar, Mara Baudena, James D Bever

Abstract readReview
In one paragraph

Review in Ecology letters, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
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  5. Symbiotic microbial population composition ofFrontiers in microbiology · 2024
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  6. Article
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  8. Article
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  11. A quantitative synthesis of soil microbial effects on plant species coexistence.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Karen C AbbottCase Western Reserve University, Cleveland, Ohio, USA.
Maarten B EppingaUniversity of Zurich, Zurich, Switzerland.
James UmbanhowarUniversity of North Carolina, Chapel Hill, North Carolina, USA.
Mara BaudenaCopernicus Institute of Sustainable Development, Utrecht University, Utrecht, The Netherlands.ORCID https://orcid.org/0000-0002-6873-6466
James D BeverUniversity of Kansas, Lawrence, Kansas, USA.ORCID https://orcid.org/0000-0003-4068-3582

Funding

US National Science Foundation DBI-1300426US National Science Foundation DEB-1556664US National Science Foundation DEB-1738041US National Science Foundation OIA-1656006
6 · The paper itself

Abstract

Microbiomes have profound effects on host fitness, yet we struggle to understand the implications for host ecology. Microbiome influence on host ecology has been investigated using two independent frameworks. Classical ecological theory powerfully represents mechanistic interactions predicting environmental dependence of microbiome effects on host ecology, but these models are notoriously difficult to evaluate empirically. Alternatively, host-microbiome feedback theory represents impacts of microbiome dynamics on host fitness as simple net effects that are easily amenable to experimental evaluation. The feedback framework enabled rapid progress in understanding microbiomes' impacts on plant ecology, and can also be applied to animal hosts. We conceptually integrate these two frameworks by deriving expressions for net feedback in terms of mechanistic model parameters. This generates a precise mapping between net feedback theory and classic population modelling, thereby merging mechanistic understanding with experimental tractability, a necessary step for building a predictive understanding of microbiome influence on host ecology.

Indexed as

MicrobiotaAnimalsEcologyFeedbackcommunity ecologyhost-pathogen interactionsmicrobiomemutualismplant-soil feedbacktheory

Identifiers

PMID34608730
PMCPMC9292004

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.