Evidence map›Paper›PMID 34607947›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2021

Context-specific regulation of lysosomal lipolysis through network-level diverting of transcription factor interactions.

Vinod K Mony, Anna Drangowska-Way, Reka Albert, Emma Harrison, Abbas Ghaddar, Mary Kate Horak, Wenfan Ke, Eyleen J O'Rourke

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Automated model refinement using perturbation-observation pairs.NPJ systems biology and applications · 2025
    Article
  3. Review
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  10. Neuronal MML-1/MXL-2 regulates systemic aging via glutamate transporter and cell nonautonomous autophagic and peroxidase activity.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Vinod K MonyDepartment of Biology, University of Virginia, Charlottesville, VA 22903.
Anna Drangowska-WayDepartment of Biology, University of Virginia, Charlottesville, VA 22903.
Reka AlbertDepartment of Physics, Pennsylvania State University, University Park, PA 16801.ORCID 0000-0002-9485-0828
Emma HarrisonDepartment of Biology, University of Virginia, Charlottesville, VA 22903.
Abbas GhaddarDepartment of Biology, University of Virginia, Charlottesville, VA 22903.ORCID 0000-0002-8695-4694
Mary Kate HorakDepartment of Cell Biology, University of Virginia, Charlottesville, VA 22903.ORCID 0000-0002-9930-5343
Wenfan KeDepartment of Biology, University of Virginia, Charlottesville, VA 22903.ORCID 0000-0002-7047-5445
Eyleen J O'RourkeDepartment of Biology, University of Virginia, Charlottesville, VA 22903; ejorourke@virginia.edu.ORCID 0000-0003-0503-4181
University of Virginia · USPennsylvania State University · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Conserved Mechanisms of Lipid Homeostasis in C. elegansR00DK087928 · NIDDK · UNIVERSITY OF VIRGINIA · PI O'ROURKE, EYLEEN JORGELINA · 2013 to 2015
$730k
Tunable White Light Laser Confocal/Spectral Imaging MicroscopyS10RR025616 · NCRR · UNIVERSITY OF VIRGINIA · PI PERIASAMY, AMMASI · 2009 to 2009
$500k
Conserved Mechanisms of Lipid Homeostasis in C. elegansK99DK087928 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI O'ROURKE, EYLEEN JORGELINA · 2010 to 2011
$180k
NCRR NIH HHS S10 RR025616NIDDK NIH HHS K99 DK087928NIDDK NIH HHS R00 DK087928NIH HHS P40 OD010440
6 · The paper itself

Abstract

Plasticity in multicellular organisms involves signaling pathways converting contexts-either natural environmental challenges or laboratory perturbations-into context-specific changes in gene expression. Congruently, the interactions between the signaling molecules and transcription factors (TF) regulating these responses are also context specific. However, when a target gene responds across contexts, the upstream TF identified in one context is often inferred to regulate it across contexts. Reconciling these stable TF-target gene pair inferences with the context-specific nature of homeostatic responses is therefore needed. The induction of the

Indexed as

AnimalsBasic Helix-Loop-Helix ProteinsCaenorhabditis elegansCaenorhabditis elegans ProteinsCarboxylic Ester HydrolasesFastingForkhead Transcription FactorsGene Expression RegulationLipaseLipolysisOxidative StressSignal TransductionTranscriptional ActivationTranscription FactorsTranscription, GeneticBasic Helix-Loop-Helix ProteinsCaenorhabditis elegans ProteinsCarboxylic Ester Hydrolasesdaf-16 protein, C elegansForkhead Transcription Factorsheat shock factor-1, C elegansHLH-30 protein, C elegansLipaselipl-3 protein, C elegansLIPL-4 protein, C elegansMXL-3 protein, C elegansTranscription FactorsfastingfatFOXO/DAF-16oxidative stressTFEB/HLH-30

Identifiers

PMID34607947
PMCPMC8521664
OpenAlexW3204634841

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.