Evidence map›Paper›PMID 34607724›Full record

ArticleHuman immunology2022

HLA-B*15 predicts survival in Egyptian patients with COVID-19.

Ahmed Samir Abdelhafiz, Asmaa Ali, Merhan A Fouda, Douaa M Sayed, Mahmoud M Kamel, Lamyaa Mohamed Kamal, Mahmoud Ali Khalil, Rania M Bakry

Abstract readComparative Study
In one paragraph

Article in Human immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Observational
  4. Article
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  7. Article
  8. Narrative Review Explaining the Role ofInfectious disease reports · 2024
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  12. Association of human leukocyte antigen class I and class II alleles and haplotypes in COVID-19 infection in a western Indian population.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2023
    Article
  13. Review
  14. The role of HLA genotypes in understanding the pathogenesis of severe COVID-19.The Egyptian journal of medical human genetics · 2023
    Review
  15. Article
  16. Review
  17. Immunoinformatics approach of epitope prediction for SARS-CoV-2.Journal, genetic engineering & biotechnology · 2022
    Article
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Ahmed Samir AbdelhafizDepartment of Clinical Pathology, National Cancer Institute, Cairo University, Cairo, Egypt. Electronic address: ahmed.samir@nci.cu.edu.eg.
Asmaa AliDepartment of Pulmonary Medicine, Abbassia Chest Hospital, MOH, Cairo, Egypt.
Merhan A FoudaDepartment of Clinical Pathology, National Cancer Institute, Cairo University, Cairo, Egypt.
Douaa M SayedDepartment of Clinical Pathology, South Egypt Cancer Institute, Assiut University, Assiut, Egypt.
Mahmoud M KamelDepartment of Clinical Pathology, National Cancer Institute, Cairo University, Cairo, Egypt.
Lamyaa Mohamed KamalDepartment of Clinical and Chemical Pathology, Elsahel Teaching Hospital, MOH, Cairo, Egypt.
Mahmoud Ali KhalilDepartment of Tropical Medicine and Infectious Disease, Imbaba Fever Hospital, MOH, Cairo, Egypt.
Rania M BakryDepartment of Clinical Pathology, South Egypt Cancer Institute, Assiut University, Assiut, Egypt.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetic differences among individuals could affect the clinical presentations and outcomes of COVID-19. Human Leukocyte Antigens are associated with COVID-19 susceptibility, severity, and prognosis. This study aimed to identify HLA-B and -C genotypes among 69 Egyptian patients with COVID-19 and correlate them with disease outcomes and other clinical and laboratory data. HLA-B and -C typing was performed using Luminex-based HLA typing kits. Forty patients (58%) had severe COVID-19; 55% of these patients died, without reported mortality in the moderate group. The alleles associated with severe COVID-19 were HLA-B*41, -B*42, -C*16, and -C*17, whereas HLA-B*15, -C*7, and -C*12 were significantly associated with protection against mortality. Regression analysis showed that HLA-B*15 was the only allele associated with predicted protection against mortality, where the likelihood of survival increased with HLA-B*15 (P < 0.001). Patient survival was less likely to occur with higher total leukocytic count, ferritin, and creatinine levels. This study provides interesting insights into the association between HLA class I alleles and protection from or severity of COVID-19 through immune response modulation. This is the first study to investigate this relationship in Egyptian patients. More studies are needed to understand how HLA class I alleles interact and affect Cytotoxic T lymphocytes and natural killer cell function.

Indexed as

AgedCOVID-19EgyptFemaleGenetic Predisposition to DiseaseHaplotypesHLA-B15 AntigenHost-Pathogen InteractionsHumansMaleMiddle AgedPredictive Value of TestsPrognosisProtective FactorsRisk AssessmentRisk FactorsHLA-B15 AntigenCOVID-19EgyptHLA-B*15MortalityPrognosis

Identifiers

PMID34607724
PMCPMC8485223

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.