Evidence map›Paper›PMID 34605970›Full record

ArticleApplied microbiology and biotechnology2021

Characterization and activity enhancement of a novel exo-type agarase Aga575 from Aquimarina agarilytica ZC1.

Chaonan Dong, Bokun Lin, Yan Song, Tao Peng, Mingqi Zhong, Jin Li, Zhong Hu

Abstract read
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In one paragraph

Article in Applied microbiology and biotechnology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Chaonan Dong *Department of Biology, Shantou University, Shantou, 515063, China.
Bokun Lin *Dongguan Key Laboratory of Environmental Medicine, School of Public Health, Guangdong Medical University, Dongguan, 523808, China. bklin@gdmu.edu.cn.ORCID http://orcid.org/0000-0003-2997-5920
Yan Song *Department of Biology, Shantou University, Shantou, 515063, China.
Tao PengDepartment of Biology, Shantou University, Shantou, 515063, China.
Mingqi ZhongDepartment of Biology, Shantou University, Shantou, 515063, China.
Jin LiDepartment of Biology, Shantou University, Shantou, 515063, China.
Zhong HuDepartment of Biology, Shantou University, Shantou, 515063, China. hzh@stu.edu.cn.

Funding

National Natural Science Foundation of China 41476150
6 · The paper itself

Abstract

The novel β-agarase gene aga575 from the agarolytic bacterium Aquimarina agarilytica ZC1 is composed of 2142 bp, and the encoded protein Aga575 has the highest amino acid sequence homology of only 65.2% with known agarases. Though carrying a domain of glycoside hydrolase family 42 in the C-terminal, Aga575 should belong to glycoside hydrolase family 50 according to the phylogenetic analysis. Gene aga575 was successfully cloned and overexpressed in Escherichia coli Rosetta (DE3) cells. The recombinant protein had the maximal agarase activity at pH 8.0 and 37 °C. The values K

Indexed as

FlavobacteriaceaeGlycoside HydrolasesCloning, MolecularHydrogen-Ion ConcentrationPhylogenyagaraseGlycoside HydrolasesAgaraseExo-typeGH50NeoagarobioseRandom mutagenesis

Identifiers

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.