Evidence map›Paper›PMID 34600019›Full record

Observational studyThe Journal of infection2021

Decreasing proportion of extended-spectrum beta-lactamase among E. coli infections during the COVID-19 pandemic in France.

Olivier Lemenand, Thomas Coeffic, Sonia Thibaut, Melanie Colomb Cotinat, Jocelyne Caillon, Gabriel Birgand, Clinical Laboratories of PRIMO Network. Nantes, France.

Abstract readObservational Study
PubMed Publisher
In one paragraph

Observational study in The Journal of infection, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 2 pooled it
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 2 syntheses or guidelines pooled it, 51 citations in OpenAlex.

  1. Pooled it
  2. Antibiotic resistance associated with the COVID-19 pandemic: a systematic review and meta-analysis.Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases · 2023
    Pooled it
  3. Article
  4. Exploring multidrug resistance patterns in community-acquiredAntimicrobial agents and chemotherapy · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Wild-Type AmpC Beta-Lactamase-ProducingDiseases (Basel, Switzerland) · 2024
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Observational
  19. Article
  20. The Impact of COVID-19 Pandemic on ESBL-ProducingAntibiotics (Basel, Switzerland) · 2023
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Olivier LemenandCentre d'appui à la prévention des infections associées aux soins des Pays de la Loire. CHU - Le Tourville, 5 rue Pr Yves Boquien, Nantes 44093, France.
Thomas CoefficCentre d'appui à la prévention des infections associées aux soins des Pays de la Loire. CHU - Le Tourville, 5 rue Pr Yves Boquien, Nantes 44093, France.
Sonia ThibautCentre d'appui à la prévention des infections associées aux soins des Pays de la Loire. CHU - Le Tourville, 5 rue Pr Yves Boquien, Nantes 44093, France.
Melanie Colomb CotinatDépartement des Maladies Infectieuses, Santé Publique France, Saint Maurice, France.
Jocelyne CaillonCentre d'appui à la prévention des infections associées aux soins des Pays de la Loire. CHU - Le Tourville, 5 rue Pr Yves Boquien, Nantes 44093, France.
Gabriel BirgandCentre d'appui à la prévention des infections associées aux soins des Pays de la Loire. CHU - Le Tourville, 5 rue Pr Yves Boquien, Nantes 44093, France; NIHR Health Protection Research Unit in Healthcare Associated Infection and Antimicrobial Resistance at Imperial College London, Hammersmith Campus, Du Cane Road, London, United Kingdom. Electronic address: gabriel.birgand@chu-nantes.fr.
Clinical Laboratories of PRIMO Network. Nantes, France.
Centre Pays de la Loire · FRSanté Publique France · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectivesWe investigated the impact of the COVID-19 and national pandemic response on the epidemiology of Extended Spectrum Beta-Lactamase producing E. coli (ESBL-E.coli) in France.

methodsIndividual microbiology records from clinical laboratories were analyzed between 1 January 2019 to 31 December 2020. The ESBL-E.coli rates from clinical samples of patients in primary care and nursing home residents were compared before and after the general lockdown in March 2020, according to demographic and geographical characteristics. Interrupted time series analyses were performed to detect measurable changes in the trend of ESBL-E.coli rates.

resultsRecords covering 793,954 E. coli isolates from 1022 clinical laboratories were analyzed. In primary care, 3.1% of E. coli isolates from clinical samples were producing ESBL before March 2020 and 2.9% since May 2020 (p < 0.001). The proportion of ESBL-E.coli decreased significantly among urine cultures, females, age categories 5-19, 40-64, > 65 year-old, and in the North, West, East and South-East regions. In nursing home, the ESBL-E.coli rate was 9.3% (monthly rate min-max: 6.5-10.5%) before March 2020 and 8.3% (7.2-9.1%) since May 2020 (p < 0.001). The reduction rate accelerated from -0.04%/month to -0.22%/month from May 2020 (p < 0.001).

conclusionInvestigation of factors that led to the decreased proportion of ESBL-E.coli during the COVID-19 pandemic is urgently needed.

Indexed as

COVID-19Escherichia coli InfectionsAdolescentAdultAgedAged, 80 and overAnti-Bacterial Agentsbeta-LactamasesChildChild, PreschoolCommunicable Disease ControlEscherichia coliFemaleFranceHumansInfantAnti-Bacterial Agentsbeta-LactamasesAntimicrobial resistanceCOVID-19ESBL-E.coliNursing homesOutpatient

Identifiers

PMID34600019
OpenAlexW3202265909

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.