Evidence map›Paper›PMID 34597675›Full record

ArticleDevelopmental biology2022

Asymmetric organelle positioning during epithelial polarization of C. elegans intestinal cells.

James N Brandt, Laura Voss, Fiona M Rambo, Katelyn Nicholson, Jackson R Thein, Lydia Fairchild, Laurence Seabrook, Danielia Lewis, Lali Guevara-Hernandez, Matthew L White and 4 more

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.8field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. Article
  3. The 3D Ultrastructure ofmicroPublication biology · 2026
    Article
  4. Single-tissue proteomics inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Review
  6. Article
  7. Delineating the mechanisms and design principles ofComputational and structural biotechnology journal · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 1 institution in 1 country.

James N BrandtDepartment of Biology, Lewis & Clark College, Portland, OR, USA.
Laura VossDepartment of Biology, Lewis & Clark College, Portland, OR, USA.
Fiona M RamboDepartment of Biology, Lewis & Clark College, Portland, OR, USA.
Katelyn NicholsonDepartment of Biology, Lewis & Clark College, Portland, OR, USA.
Jackson R TheinDepartment of Biology, Lewis & Clark College, Portland, OR, USA.
Lydia FairchildDepartment of Biology, Lewis & Clark College, Portland, OR, USA.
Laurence SeabrookDepartment of Biology, Lewis & Clark College, Portland, OR, USA.
Danielia LewisDepartment of Biology, Lewis & Clark College, Portland, OR, USA.
Lali Guevara-HernandezDepartment of Biology, Lewis & Clark College, Portland, OR, USA.
Matthew L WhiteDepartment of Biology, Lewis & Clark College, Portland, OR, USA.
Luca SaxDepartment of Biology, Lewis & Clark College, Portland, OR, USA.
Victoria EichtenDepartment of Biology, Lewis & Clark College, Portland, OR, USA.
Logan HarperDepartment of Biology, Lewis & Clark College, Portland, OR, USA.
Greg J HermannDepartment of Biology, Lewis & Clark College, Portland, OR, USA. Electronic address: hermann@lclark.edu.
Lewis & Clark College · US

Funding

Rab activation by ABC proteins during lysosome-related organelle biogenesisR15GM120639 · NIGMS · LEWIS AND CLARK COLLEGE · PI HERMANN, GREG J · 2016 to 2016
$383k
Howard Hughes Medical InstituteNIGMS NIH HHS R15 GM120639
6 · The paper itself

Abstract

While the epithelial cell cortex displays profound asymmetries in protein distribution and morphology along the apico-basal axis, the extent to which the cytoplasm is similarly polarized within epithelial cells remains relatively unexplored. We show that cytoplasmic organelles within C. elegans embryonic intestinal cells develop extensive apico-basal polarity at the time they establish cortical asymmetry. Nuclei and conventional endosomes, including early endosomes, late endosomes, and lysosomes, become polarized apically. Lysosome-related gut granules, yolk platelets, and lipid droplets become basally enriched. Removal of par-3 activity does not disrupt organelle positioning, indicating that cytoplasmic apico-basal asymmetry is independent of the PAR polarity pathway. Blocking the apical migration of nuclei leads to the apical positioning of gut granules and yolk platelets, whereas the asymmetric localization of conventional endosomes and lipid droplets is unaltered. This suggests that nuclear positioning organizes some, but not all, cytoplasmic asymmetries in this cell type. We show that gut granules become apically enriched when WHT-2 and WHT-7 function is disrupted, identifying a novel role for ABCG transporters in gut granule positioning during epithelial polarization. Analysis of WHT-2 and WHT-7 ATPase mutants is consistent with a WHT-2/WHT-7 heterodimer acting as a transporter in gut granule positioning. In wht-2(-) mutants, the polarized distribution of other organelles is not altered and gut granules do not take on characteristics of conventional endosomes that could have explained their apical mispositioning. During epithelial polarization wht-2(-) gut granules exhibit a loss of the Rab32/38 family member GLO-1 and ectopic expression of GLO-1 is sufficient to rescue the basal positioning of wht-2(-) and wht-7(-) gut granules. Furthermore, depletion of GLO-1 causes the mislocalization of the endolysosomal RAB-7 to gut granules and RAB-7 drives the apical mispositioning of gut granules when GLO-1, WHT-2, or WHT-7 function is disrupted. We suggest that ABC transporters residing on gut granules can regulate Rab dynamics to control organelle positioning during epithelial polarization.

Indexed as

Cell PolarityAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsEpithelial CellsIntestinal MucosaOrganellesCaenorhabditis elegans ProteinsABC transporterC. elegansEpithelial polarizationOrganelle positioningRab GTPase

Identifiers

PMID34597675
PMCPMC8665101
OpenAlexW3201888187

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.