Evidence map›Paper›PMID 34597596›Full record

ArticleMolecular cell2021

The Protexin complex counters resection on stalled forks to promote homologous recombination and crosslink repair.

Richard O Adeyemi, Nicholas A Willis, Andrew E H Elia, Connor Clairmont, Shibo Li, Xiaohua Wu, Alan D D'Andrea, Ralph Scully, Stephen J Elledge

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 26 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 1 country.

Richard O AdeyemiDepartment of Genetics, Harvard Medical School, and Division of Genetics, Brigham and Women's Hospital, Howard Hughes Medical Institute, Boston, MA 02115, USA.
Nicholas A WillisDepartment of Medicine and Cancer Research Institute, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA 02215, USA.
Andrew E H EliaDepartment of Genetics, Harvard Medical School, and Division of Genetics, Brigham and Women's Hospital, Howard Hughes Medical Institute, Boston, MA 02115, USA.
Connor ClairmontDepartment of Radiation Oncology and Center for DNA Damage and Repair, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA 02215, USA.
Shibo LiDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Xiaohua WuDepartment of Molecular Medicine, The Scripps Research Institute, La Jolla, CA 92037, USA.
Alan D D'AndreaDepartment of Radiation Oncology and Center for DNA Damage and Repair, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA 02215, USA.
Ralph ScullyDepartment of Medicine and Cancer Research Institute, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, MA 02215, USA.
Stephen J ElledgeDepartment of Genetics, Harvard Medical School, and Division of Genetics, Brigham and Women's Hospital, Howard Hughes Medical Institute, Boston, MA 02115, USA. Electronic address: selledge@genetics.med.harvard.edu.
Brigham and Women's Hospital · USBeth Israel Deaconess Medical Center · USHarvard University · USScripps Research Institute · US

Funding

ANALYSIS OF BRCA1 RECOMBINATION FUNCTIONSR01CA095175 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI SCULLY, RALPH · 2002 to 2021
$4.9M
Study the mechanisms underlying common fragile site protectionR01CA187052 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI WU, XIAOHUA · 2015 to 2025
$4.2M
Analysis of the Mammalian DNA Damage ResponseR01CA234600 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI ELLEDGE, STEPHEN J · 2019 to 2023
$2.0M
FANCM in repair of stalled replication forksR01CA217991 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI SCULLY, RALPH · 2017 to 2021
$2.0M
Regulation of stalled fork repair in mammalian cellsR01GM134425 · NIGMS · BETH ISRAEL DEACONESS MEDICAL CENTER · PI SCULLY, RALPH · 2019 to 2022
$1.4M
Howard Hughes Medical InstituteNCI NIH HHS R01 CA095175NCI NIH HHS R01 CA187052NCI NIH HHS R01 CA217991NCI NIH HHS R01 CA234600NIGMS NIH HHS R01 GM134425
6 · The paper itself

Abstract

Protection of stalled replication forks is critical to genomic stability. Using genetic and proteomic analyses, we discovered the Protexin complex containing the ssDNA binding protein SCAI and the DNA polymerase REV3. Protexin is required specifically for protecting forks stalled by nucleotide depletion, fork barriers, fragile sites, and DNA inter-strand crosslinks (ICLs), where it promotes homologous recombination and repair. Protexin loss leads to ssDNA accumulation and profound genomic instability in response to ICLs. Protexin interacts with RNA POL2, and both oppose EXO1's resection of DNA on forks remodeled by the FANCM translocase activity. This pathway acts independently of BRCA/RAD51-mediated fork stabilization, and cells with BRCA2 mutations were dependent on SCAI for survival. These data suggest that Protexin and its associated factors establish a new fork protection pathway that counteracts fork resection in part through a REV3 polymerase-dependent resynthesis mechanism of excised DNA, particularly at ICL stalled forks.

Indexed as

AnimalsBRCA2 ProteinCell Line, TumorCRISPR-Cas SystemsDNA-Binding ProteinsDNA-Directed DNA PolymeraseDNA HelicasesDNA RepairDNA Repair EnzymesDNA, Single-StrandedExodeoxyribonucleasesHeLa CellsHumansMevalonic AcidMiceMultiprotein ComplexesBRCA2 ProteinBRCA2 protein, humanDNA-Binding ProteinsDNA-Directed DNA PolymeraseDNA HelicasesDNA Repair EnzymesDNA, Single-StrandedEXO1 protein, humanExodeoxyribonucleasesFANCM protein, humanMevalonic AcidMultiprotein ComplexesREV3L protein, humanRNA, Guide, CRISPR-Cas SystemsRNA, Small InterferingSCAI protein, humanTranscription FactorsCRISPREXO1FANCMhomologous recombinationinter-strand crosslinksProtexinreplication stressresectionREV3LSCAI

Identifiers

PMID34597596
PMCPMC8588999
OpenAlexW3202872383

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.