Evidence map›Paper›PMID 34597593›Full record

ArticleCell host & microbe2021

Prophages encode phage-defense systems with cognate self-immunity.

Siân V Owen, Nicolas Wenner, Charles L Dulberger, Ella V Rodwell, Arthur Bowers-Barnard, Natalia Quinones-Olvera, Daniel J Rigden, Eric J Rubin, Ethan C Garner, Michael Baym and 1 more

Abstract readComment
In one paragraph

Article in Cell host & microbe, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 85 papers.

0numbers the graph read from it
0cells of the map it votes in
85citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

85 citing papers in PubMed.

  1. Revisiting the life cycle of temperate phages.Nature reviews. Microbiology · 2026
    Review
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  12. Genomics of Irish swine-derivedMicrobial genomics · 2026
    Article
  13. Prophage diversity in poultry-associatedFrontiers in microbiology · 2026
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Why do bacteria accumulate antiphage defence systems?Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review

25 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors.

Siân V OwenDepartment of Biomedical Informatics and Laboratory of Systems Pharmacology, Harvard Medical School, Boston, MA, USA. Electronic address: sianvictoriaowen@gmail.com.
Nicolas WennerInstitute of Infection, Veterinary & Ecological Sciences, University of Liverpool, Liverpool, UK; Biozentrum, University of Basel, Basel, Switzerland.
Charles L DulbergerDepartment of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, MA, USA; Department of Molecular and Cellular Biology, Harvard University, Boston, MA, USA.
Ella V RodwellInstitute of Infection, Veterinary & Ecological Sciences, University of Liverpool, Liverpool, UK.
Arthur Bowers-BarnardInstitute of Infection, Veterinary & Ecological Sciences, University of Liverpool, Liverpool, UK.
Natalia Quinones-OlveraDepartment of Biomedical Informatics and Laboratory of Systems Pharmacology, Harvard Medical School, Boston, MA, USA.
Daniel J RigdenInstitute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, UK.
Eric J RubinDepartment of Immunology and Infectious Diseases, Harvard T.H. Chan School of Public Health, Boston, MA, USA.
Ethan C GarnerDepartment of Molecular and Cellular Biology, Harvard University, Boston, MA, USA.
Michael BaymDepartment of Biomedical Informatics and Laboratory of Systems Pharmacology, Harvard Medical School, Boston, MA, USA. Electronic address: baym@hms.harvard.edu.
Jay C D HintonInstitute of Infection, Veterinary & Ecological Sciences, University of Liverpool, Liverpool, UK. Electronic address: jay.hinton@liverpool.ac.uk.

Funding

Evolutionary Tradeoffs in Antibiotic ResistanceR35GM133700 · NIGMS · HARVARD MEDICAL SCHOOL · PI BAYM, MICHAEL · 2019 to 2023
$2.4M
NIGMS NIH HHS R35 GM133700Wellcome Trust
6 · The paper itself

Abstract

Temperate phages are pervasive in bacterial genomes, existing as vertically inherited islands termed prophages. Prophages are vulnerable to predation of their host bacterium by exogenous phages. Here, we identify BstA, a family of prophage-encoded phage-defense proteins in diverse Gram-negative bacteria. BstA localizes to sites of exogenous phage DNA replication and mediates abortive infection, suppressing the competing phage epidemic. During lytic replication, the BstA-encoding prophage is not itself inhibited by BstA due to self-immunity conferred by the anti-BstA (aba) element, a short stretch of DNA within the bstA locus. Inhibition of phage replication by distinct BstA proteins from Salmonella, Klebsiella, and Escherichia prophages is generally interchangeable, but each possesses a cognate aba element. The specificity of the aba element ensures that immunity is exclusive to the replicating prophage, preventing exploitation by variant BstA-encoding phages. The BstA protein allows prophages to defend host cells against exogenous phage attack without sacrificing the ability to replicate lytically.

Indexed as

BacteriophagesProphagesGenome, BacterialSalmonellaabaabortive infectionbacteriaBstAlysogenyphage defensephage resistanceprophageself-immunitysuperinfection

Identifiers

PMID34597593
PMCPMC8585504

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.