Evidence map›Paper›PMID 34597402›Full record

ArticlePlant physiology2022

A BTB-TAZ protein is required for gene activation by Cauliflower mosaic virus 35S multimerized enhancers.

Sonia Irigoyen, Manikandan Ramasamy, Anjali Misra, Thomas D McKnight, Kranthi K Mandadi

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Plant physiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.3field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

  1. International journal of molecular sciences · 2026
    Article
  2. Review
  3. Article
  4. Genome-Wide Identification and Expression Analysis of theInternational journal of molecular sciences · 2024
    Article
  5. Article
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Sonia IrigoyenTexas A&M AgriLife Research and Extension Center, Weslaco, Texas 79596, USA.ORCID 0000-0003-0647-4808
Manikandan RamasamyTexas A&M AgriLife Research and Extension Center, Weslaco, Texas 79596, USA.ORCID 0000-0003-1788-241X
Anjali MisraDepartment of Biology, Texas A&M University, College Station, Texas 77843, USA.
Thomas D McKnightDepartment of Biology, Texas A&M University, College Station, Texas 77843, USA.ORCID 0000-0002-9863-2035
Kranthi K MandadiTexas A&M AgriLife Research and Extension Center, Weslaco, Texas 79596, USA.ORCID 0000-0003-2986-4016
Texas A&M University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Arabidopsis (Arabidopsis thaliana) BTB-TAZ DOMAIN PROTEIN 2 (BT2) contains an N-terminal BTB domain, a central TAZ zinc-finger protein-protein interaction domain, and a C-terminal calmodulin-binding domain. We previously demonstrated that BT2 regulates telomerase activity and mediates multiple responses to nutrients, hormones, and abiotic stresses in Arabidopsis. Here, we describe the essential role of BT2 in activation of genes by multimerized Cauliflower mosaic virus 35S (35S) enhancers. Loss of BT2 function in several well-characterized 35S enhancer activation-tagged lines resulted in suppression of the activation phenotypes. Suppression of the phenotypes was associated with decreased transcript abundance of the tagged genes. Nuclear run-on assays, mRNA decay studies, and bisulfite sequencing revealed that BT2 is required to maintain the transcriptionally active state of the multimerized 35S enhancers, and lack of BT2 leads to hypermethylation of the 35S enhancers. The TAZ domain and the Ca++/calmodulin-binding domain of BT2 are critical for its function and 35S enhancer activity. We further demonstrate that BT2 requires CULLIN3 and two bromodomain-containing Global Transcription factor group E proteins (GTE9 and GTE11), to regulate 35S enhancer activity. We propose that the BT2-CULLIN3 ubiquitin ligase, through interactions with GTE9 and GTE11, regulates 35S enhancer activity in Arabidopsis.

Indexed as

ArabidopsisCaulimovirusGene Expression Regulation, PlantGenes, PlantGenetic VariationGenotypePlant ProteinsPlants, Genetically ModifiedPromoter Regions, GeneticTranscriptional ActivationPlant Proteins

Identifiers

PMID34597402
PMCPMC8774732
OpenAlexW3202069815

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.