Evidence map›Paper›PMID 34596730›Full record

ArticleArchives of toxicology2021

A novel regQTL-SNP and the risk of lung cancer: a multi-dimensional study.

Yuhui Yu, Liping Mao, Zhounan Cheng, Xiaoqi Zhu, Jiahua Cui, Xiaoyu Fu, Jingwen Cheng, Yan Zhou, Anni Qiu, Yang Dong and 6 more

Abstract read
PubMed Publisher
In one paragraph

Article in Archives of toxicology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 28 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Yuhui Yu *Department of Epidemiology, School of Public Health, Nantong University, Nantong, 226019, Jiangsu, China.
Liping Mao *Department of Oncology, The Sixth People's Hospital of Nantong, Nantong, China.
Zhounan Cheng *Department of Epidemiology, School of Public Health, Nantong University, Nantong, 226019, Jiangsu, China.
Xiaoqi ZhuDepartment of Epidemiology, School of Public Health, Nantong University, Nantong, 226019, Jiangsu, China.
Jiahua CuiDepartment of Oncology, The First Affiliated Hospital With Nanjing Medical University, Nanjing, China.
Xiaoyu FuDepartment of Epidemiology, School of Public Health, Nantong University, Nantong, 226019, Jiangsu, China.
Jingwen ChengDepartment of Epidemiology, School of Public Health, Nantong University, Nantong, 226019, Jiangsu, China.
Yan ZhouDepartment of Epidemiology, School of Public Health, Nantong University, Nantong, 226019, Jiangsu, China.
Anni QiuDepartment of Epidemiology, School of Public Health, Nantong University, Nantong, 226019, Jiangsu, China.
Yang DongDepartment of Epidemiology, School of Public Health, Nantong University, Nantong, 226019, Jiangsu, China.
Xun ZhuangDepartment of Epidemiology, School of Public Health, Nantong University, Nantong, 226019, Jiangsu, China.
Yihua LuDepartment of Epidemiology, School of Public Health, Nantong University, Nantong, 226019, Jiangsu, China.
Yulong LianDepartment of Epidemiology, School of Public Health, Nantong University, Nantong, 226019, Jiangsu, China.
Tian TianDepartment of Epidemiology, School of Public Health, Nantong University, Nantong, 226019, Jiangsu, China. ttyes_01@163.com.
Shuangshuang WuJiangsu Provincial Key Laboratory of Geriatrics, Department of Geriatrics, The First Affiliated Hospital With Nanjing Medical University, Nanjing, 210029, Jiangsu, China. polariswu7632@126.com.
Minjie ChuDepartment of Epidemiology, School of Public Health, Nantong University, Nantong, 226019, Jiangsu, China. chuminjie@ntu.edu.cn.ORCID 0000-0002-7533-9119
Nantong University · CNNanjing Medical University · CN

Funding

the national natural science foundation of china 81502876the national natural science foundation of china 81703297
6 · The paper itself

Abstract

RegQTL, a novel concept, indicates that different genotypes of some SNPs have differential effects on the expression patterns of miRNAs and their target mRNAs. We aimed to identify the association between regQTL-SNPs and lung cancer risk and to explore the underlying mechanisms. The two-stage case-control study included the first stage in a Chinese population (626 lung cancer cases and 667 healthy controls) and the second stage in a European population (18,082 lung cancer cases and 13,780 healthy controls). Functional annotations were conducted based on the GTEx and the TCGA databases. Functional experiments were performed to explore the underlying biological mechanisms in vitro and vivo. After strict screening, five candidate regQTL-SNPs (rs7110737, rs273957, rs6593210, rs3768617, and rs6836432) were selected. Among them, the variant T allele of rs3768617 in LAMC1 was found to significantly increase the risk of lung cancer (first stage: P = 0.044; second stage: P = 0.007). The eQTL analysis showed that LAMC1 expression level was significantly higher in subjects with the variant T allele of rs3768617 (P = 1.10 × 10

Indexed as

Genetic Predisposition to DiseaseAnimalsAsian PeopleCase-Control StudiesCell Line, TumorDatabases, GeneticGenotypeHumansLamininLung NeoplasmsMaleMiceMice, Inbred BALB CMice, NudeMicroRNAsPolymorphism, Single NucleotideLamininlaminin gamma 1MicroRNAsMIRN548 microRNA, humaneQTLLAMC1Lung cancerregQTLSusceptibility

Identifiers

PMID34596730
OpenAlexW3202551161

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.