Evidence map›Paper›PMID 34596045›Full record

ArticleeLife2021

HIF1α stabilization in hypoxia is not oxidant-initiated.

Amit Kumar, Manisha Vaish, Saravanan S Karuppagounder, Irina Gazaryan, John W Cave, Anatoly A Starkov, Elizabeth T Anderson, Sheng Zhang, John T Pinto, Austin M Rountree and 3 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 37 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Amit KumarBurke Neurological Institute, White Plains, New York, United States.ORCID 0000-0001-5017-9887
Manisha VaishBurke Neurological Institute, White Plains, New York, United States.
Saravanan S KaruppagounderBurke Neurological Institute, White Plains, New York, United States.
Irina GazaryanDepartment of Anatomy and Cell Biology, New York Medical College, New York, United States.
John W CaveBurke Neurological Institute, White Plains, New York, United States.
Anatoly A StarkovBrain and Mind Research Institute, Weill Medical College of Cornell University, New York, United States.
Elizabeth T AndersonInstitute for Biotechnology, Cornell University, Ithaca, United States.
Sheng ZhangInstitute for Biotechnology, Cornell University, Ithaca, United States.ORCID 0000-0001-8206-1007
John T PintoDepartment of Biochemistry and Molecular Biology, New York Medical College, Valhalla, United States.
Austin M RountreeDepartment of Medicine, University of Washington, Seattle, United States.
Wang WangDepartment of Pain and Anesthesiology, University of Washington, Seattle, United States.
Ian R SweetDepartment of Medicine, University of Washington, Seattle, United States.ORCID 0000-0002-7565-1663
Rajiv R RatanBurke Neurological Institute, White Plains, New York, United States.ORCID 0000-0002-9081-2701
Cornell University · USUniversity of Washington · USNew York Medical College · USBurke Medical Research Institute · US

Funding

Vector and Transgenic Mouse CoreP30DK017047 · NIDDK · UNIVERSITY OF WASHINGTON · PI Karin E Bornfeldt · 1986 to 2026
$41.4M
TRANSCRIPTIONAL RESPONSES TO MITOCHONDRIAL DYSFUNCTIONP01AG014930 · NIA · WINIFRED MASTERSON BURKE MED RES INST · PI GIBSON, GARY E · 1999 to 2020
$30.7M
NIA NIH HHS P01 AG014930NIDDK NIH HHS P30 DK017047
6 · The paper itself

Abstract

Hypoxic adaptation mediated by HIF transcription factors requires mitochondria, which have been implicated in regulating HIF1α stability in hypoxia by distinct models that involve consuming oxygen or alternatively converting oxygen into the second messenger peroxide. Here, we use a ratiometric, peroxide reporter, HyPer to evaluate the role of peroxide in regulating HIF1α stability. We show that antioxidant enzymes are neither homeostatically induced nor are peroxide levels increased in hypoxia. Additionally, forced expression of diverse antioxidant enzymes, all of which diminish peroxide, had disparate effects on HIF1α protein stability. Moreover, decrease in lipid peroxides by glutathione peroxidase-4 or superoxide by mitochondrial SOD, failed to influence HIF1α protein stability. These data show that mitochondrial, cytosolic or lipid ROS were not necessary for HIF1α stability, and favor a model where mitochondria contribute to hypoxic adaptation as oxygen consumers.

Indexed as

Cell HypoxiaAnimalsHeLa CellsHumansHypoxia-Inducible Factor 1, alpha SubunitMaleMiceMitochondriaPeroxidesProtein StabilityRatsRats, Sprague-DawleySignal TransductionHIF1A protein, humanHif1a protein, mouseHif1a protein, ratHypoxia-Inducible Factor 1, alpha SubunitPeroxidescell biologyHIF1α stabilityHIF PHDshypoxiamitochondrianeuroscienceoxygenperoxide

Identifiers

PMID34596045
PMCPMC8530508
OpenAlexW3204088622

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.