Evidence map›Paper›PMID 34595846›Full record

ArticleThe plant genome2021

Genomic prediction modeling of soybean biomass using UAV-based remote sensing and longitudinal model parameters.

Yusuke Toda, Akito Kaga, Hiromi Kajiya-Kanegae, Tomohiro Hattori, Shuhei Yamaoka, Masanori Okamoto, Hisashi Tsujimoto, Hiroyoshi Iwata

Open access · goldAbstract read
In one paragraph

Article in The plant genome, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
4.0field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Hyperspectral phenotyping and GWAS identify novel QTLs for soybean photosynthetic rate.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  3. Comparative analysis of genomic prediction approaches for multiple time-resolved traits in maize.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Modeling soybean growth: A mixed model approach.PLoS computational biology · 2024
    Article
  10. Reaction norm for genomic prediction of plant growth: modeling drought stress response in soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
    Article
  11. Article
  12. Article
  13. Multi-Omics Techniques for Soybean Molecular Breeding.International journal of molecular sciences · 2022
    Review
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Yusuke TodaGraduate School of Agricultural and Life Sciences, The Univ. of Tokyo, 1-1-1 Yayoi, Bunkyo, Tokyo, 113-8657, Japan.
Akito KagaInstitute of Crop Science, National Agriculture and Food Research Organization, 2-1-2 Kannondai, Tsukuba, Ibaraki, 305-8518, Japan.
Hiromi Kajiya-KanegaeResearch Center for Agricultural Information Technology, National Agriculture and Food Research Organization, Kintetsu Kasumigaseki Building, 3-5-1 Kasumigaseki, Chiyoda, Tokyo, 100-0013, Japan.
Tomohiro HattoriGraduate School of Agricultural and Life Sciences, The Univ. of Tokyo, 1-1-1 Yayoi, Bunkyo, Tokyo, 113-8657, Japan.
Shuhei YamaokaGraduate School of Agricultural and Life Sciences, The Univ. of Tokyo, 1-1-1 Yayoi, Bunkyo, Tokyo, 113-8657, Japan.
Masanori OkamotoCenter for Bioscience Research and Education, Utsunomiya Univ., 350 Minecho, Utsunomiya, Tochigi, 321-8505, Japan.
Hisashi TsujimotoArid Land Research Center, Tottori Univ., 1390 Hamasaka, Tottori, 680-0001, Japan.
Hiroyoshi IwataGraduate School of Agricultural and Life Sciences, The Univ. of Tokyo, 1-1-1 Yayoi, Bunkyo, Tokyo, 113-8657, Japan.
The University of Tokyo · JPNational Agriculture and Food Research Organization · JPTottori University · JPUtsunomiya University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The application of remote sensing in plant breeding can provide rich information about the growth processes of plants, which leads to better understanding concerning crop yield. It has been shown that traits measured by remote sensing were also beneficial for genomic prediction (GP) because the inclusion of remote sensing data in multitrait models improved prediction accuracies of target traits. However, the present multitrait GP model cannot incorporate high-dimensional remote sensing data due to the difficulty in the estimation of a covariance matrix among the traits, which leads to failure in improving its prediction accuracy. In this study, we focused on growth models to express growth patterns using remote sensing data with a few parameters and investigated whether a multitrait GP model using these parameters could derive better prediction accuracy of soybean [Glycine max (L.) Merr.] biomass. A total of 198 genotypes of soybean germplasm were cultivated in experimental fields, and longitudinal changes of their canopy height and area were measured continuously via remote sensing with an unmanned aerial vehicle. Growth parameters were estimated by applying simple growth models and incorporated into the GP of biomass. By evaluating heritability and correlation, we showed that the estimated growth parameters appropriately represented the observed growth curves. Also, the use of these growth parameters in the multitrait GP model contributed to successful biomass prediction. We conclude that the growth models could describe the genetic variation of soybean growth curves based on several growth parameters. These dimension-reduction growth models will be indispensable for extracting useful information from remote sensing data and using this data in GP and plant breeding.

Indexed as

Glycine maxRemote Sensing TechnologyBiomassGenomicsPlant Breeding

Identifiers

PMID34595846
PMCPMC12807238
OpenAlexW3204726977

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.