Evidence map›Paper›PMID 34595725›Full record

ArticleMolecular biotechnology2022

Constitutive Defense Strategy of Coffee Under Field Conditions: A Comparative Assessment of Resistant and Susceptible Cultivars to Rust.

Tharyn Reichel, Mário Lúcio Vilela de Resende, Ana Cristina Andrade Monteiro, Natália Chagas Freitas, Deila Magna Dos Santos Botelho

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Molecular biotechnology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Tharyn ReichelDepartment of Plant Pathology, Federal University of Lavras, Lavras, MG, Brazil.ORCID http://orcid.org/0000-0003-2754-0245
Mário Lúcio Vilela de ResendeDepartment of Plant Pathology, Federal University of Lavras, Lavras, MG, Brazil. mlucio@ufla.br.ORCID http://orcid.org/0000-0003-3357-5057
Ana Cristina Andrade MonteiroAgroteste, Lavras, MG, Brazil.
Natália Chagas FreitasEmbrapa Agroenergy, Brasília, Brazil.
Deila Magna Dos Santos BotelhoDepartment of Plant Pathology, Federal University of Lavras, Lavras, MG, Brazil.
Universidade Federal de Lavras · BRBrazilian Agricultural Research Corporation · BR

Funding

Coordenação de Aperfeiçoamento de Pessoal de Nível Superior 001
6 · The paper itself

Abstract

Coffea arabica is the most economically important coffee species worldwide. However, its production is severely limited by diseases such as rust. The mechanisms underlying constitutive defense responses in coffee are still poorly understood, compared with induced defense mechanisms. We aimed to characterize constitutive defense responses of thirteen cultivars of C. arabica. Cultivars were classified under field conditions according to the level of resistance to rust: resistant (R), moderately resistant (MR), and susceptible (S). Based on this classification, the stability of eight reference genes (RGs) was evaluated. The most stable RGs were EF1α, APT1, and 24S. We also evaluated the expression of CaWRKY1, CaPAL1, CaCAD1, and CaPOX1, and activities of PAL, CAD, and POX, which are involved in lignin biosynthesis, and leaf content of total phenolic compounds and lignin. Gene expression and enzymatic activity were not correlated with defense metabolites in the R cultivar group but showed a negative correlation with phenolic compounds in MR cultivars. Cultivar S showed positive correlations of gene expression and enzyme activity with phenolic compounds. These results may assist coffee breeding programs regarding selection of genotypes and in optimization of rust resistance.

Indexed as

Disease ResistanceCoffeeGene Expression ProfilingGene Expression Regulation, PlantLigninPhenolsPlant LeavesPlant ProteinsCoffeeLigninPhenolsPlant ProteinsCoffea arabicaGene expressionHemileia vastatrixIntegrated analysesLigninReference genes

Identifiers

PMID34595725
OpenAlexW3204568994

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.