Evidence map›Paper›PMID 34595164›Full record

ArticleFrontiers in cell and developmental biology2021

Heme Oxygenase-1 at the Nexus of Endothelial Cell Fate Decision Under Oxidative Stress.

Sindhushree Raghunandan, Srinivasan Ramachandran, Eugene Ke, Yifei Miao, Ratnesh Lal, Zhen Bouman Chen, Shankar Subramaniam

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cell and developmental biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 12 citations in OpenAlex.

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  8. Effects ofLife (Basel, Switzerland) · 2024
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  10. Salvianolic acid A alleviates HScientific reports · 2024
    Article
  11. The matricellular protein CCN3 supports lung endothelial homeostasis and function.American journal of physiology. Lung cellular and molecular physiology · 2023
    Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Sindhushree RaghunandanDepartment of Bioengineering, University of California, San Diego, San Diego, CA, United States.
Srinivasan RamachandranDepartment of Bioengineering, University of California, San Diego, San Diego, CA, United States.
Eugene KeDepartment of Bioengineering, University of California, San Diego, San Diego, CA, United States.
Yifei MiaoDepartment of Diabetes Complications and Metabolism, City of Hope, Duarte, CA, United States.
Ratnesh LalDepartment of Bioengineering, University of California, San Diego, San Diego, CA, United States.
Zhen Bouman ChenDepartment of Diabetes Complications and Metabolism, City of Hope, Duarte, CA, United States.
Shankar SubramaniamDepartment of Bioengineering, University of California, San Diego, San Diego, CA, United States.
University of California, San Diego · USCity of Hope · US

Funding

Long non-coding RNA-mediated chromatin remodeling in angiogenesisR01HL145170 · NHLBI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI CHEN, ZHEN BOUMAN · 2019 to 2023
$2.6M
Hypoxia-Suppressed Dicer and AGO1 Promote AngiogenesisR00HL122368 · NHLBI · BECKMAN RESEARCH INSTITUTE/CITY OF HOPE · PI CHEN, ZHEN BOUMAN · 2017 to 2019
$747k
Hypoxia-Suppressed Dicer and AGO1 Promote AngiogenesisK99HL122368 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI CHEN, ZHEN BOUMAN · 2014 to 2015
$268k
NHLBI NIH HHS K99 HL122368NHLBI NIH HHS R00 HL122368NHLBI NIH HHS R01 HL145170
6 · The paper itself

Abstract

Endothelial cells (ECs) form the inner lining of blood vessels and are central to sensing chemical perturbations that can lead to oxidative stress. The degree of stress is correlated with divergent phenotypes such as quiescence, cell death, or senescence. Each possible cell fate is relevant for a different aspect of endothelial function, and hence, the regulation of cell fate decisions is critically important in maintaining vascular health. This study examined the oxidative stress response (OSR) in human ECs at the boundary of cell survival and death through longitudinal measurements, including cellular, gene expression, and perturbation measurements. 0.5 mM hydrogen peroxide (HP) produced significant oxidative stress, placed the cell at this junction, and provided a model to study the effectors of cell fate. The use of systematic perturbations and high-throughput measurements provide insights into multiple regimes of the stress response. Using a systems approach, we decipher molecular mechanisms across these regimes. Significantly, our study shows that heme oxygenase-1 (HMOX1) acts as a gatekeeper of cell fate decisions. Specifically, HP treatment of HMOX1 knockdown cells reversed the gene expression of about 51% of 2,892 differentially expressed genes when treated with HP alone, affecting a variety of cellular processes, including anti-oxidant response, inflammation, DNA injury and repair, cell cycle and growth, mitochondrial stress, metabolic stress, and autophagy. Further analysis revealed that these switched genes were highly enriched in three spatial locations viz., cell surface, mitochondria, and nucleus. In particular, it revealed the novel roles of HMOX1 on cell surface receptors EGFR and IGFR, mitochondrial ETCs (MTND3, MTATP6), and epigenetic regulation through chromatin modifiers (KDM6A, RBBP5, and PPM1D) and long non-coding RNA (lncRNAs) in orchestrating the cell fate at the boundary of cell survival and death. These novel aspects suggest that HMOX1 can influence transcriptional and epigenetic modulations to orchestrate OSR affecting cell fate decisions.

Indexed as

heme oxygease-1HMOX1HUVEChydrogen peroxideoxidative stressROS

Identifiers

PMID34595164
PMCPMC8476872
OpenAlexW3200844304

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.