Evidence map›Paper›PMID 34595149›Full record

ArticleFrontiers in public health2021

Performance Evaluation of Regression Models for the Prediction of the COVID-19 Reproduction Rate.

Jayakumar Kaliappan, Kathiravan Srinivasan, Saeed Mian Qaisar, Karpagam Sundararajan, Chuan-Yu Chang, Suganthan C

Abstract read
In one paragraph

Article in Frontiers in public health, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jayakumar KaliappanSchool of Computer Science and Engineering, Vellore Institute of Technology, Vellore, India.
Kathiravan SrinivasanSchool of Computer Science and Engineering, Vellore Institute of Technology, Vellore, India.
Saeed Mian QaisarElectrical and Computer Engineering Department, Effat University, Jeddah, Saudi Arabia.
Karpagam SundararajanSchool of Information Technology and Engineering, Vellore Institute of Technology, Vellore, India.
Chuan-Yu ChangDepartment of Computer Science and Information Engineering, National Yunlin University of Science and Technology, Douliu, Taiwan.
Suganthan CSchool of Social Sciences and Languages, Vellore Institute of Technology, Vellore, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This paper aims to evaluate the performance of multiple non-linear regression techniques, such as support-vector regression (SVR), k-nearest neighbor (KNN), Random Forest Regressor, Gradient Boosting, and XGBOOST for COVID-19 reproduction rate prediction and to study the impact of feature selection algorithms and hyperparameter tuning on prediction. Sixteen features (for example, Total_cases_per_million and Total_deaths_per_million) related to significant factors, such as testing, death, positivity rate, active cases, stringency index, and population density are considered for the COVID-19 reproduction rate prediction. These 16 features are ranked using Random Forest, Gradient Boosting, and XGBOOST feature selection algorithms. Seven features are selected from the 16 features according to the ranks assigned by most of the above mentioned feature-selection algorithms. Predictions by historical statistical models are based solely on the predicted feature and the assumption that future instances resemble past occurrences. However, techniques, such as Random Forest, XGBOOST, Gradient Boosting, KNN, and SVR considered the influence of other significant features for predicting the result. The performance of reproduction rate prediction is measured by mean absolute error (MAE), mean squared error (MSE), root mean squared error (RMSE), R-Squared, relative absolute error (RAE), and root relative squared error (RRSE) metrics. The performances of algorithms with and without feature selection are similar, but a remarkable difference is seen with hyperparameter tuning. The results suggest that the reproduction rate is highly dependent on many features, and the prediction should not be based solely upon past values. In the case without hyperparameter tuning, the minimum value of RAE is 0.117315935 with feature selection and 0.0968989 without feature selection, respectively. The KNN attains a low MAE value of 0.0008 and performs well without feature selection and with hyperparameter tuning. The results show that predictions performed using all features and hyperparameter tuning is more accurate than predictions performed using selected features.

Indexed as

COVID-19Birth RateCluster AnalysisHumansReproductionSARS-CoV-2COVID-19feature selectionmachine learningprediction errorregressionreproduction rate prediction

Identifiers

PMID34595149
PMCPMC8476853

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.