Evidence map›Paper›PMID 34593997›Full record

ArticleThe ISME journal2022

Bacillus velezensis stimulates resident rhizosphere Pseudomonas stutzeri for plant health through metabolic interactions.

Xinli Sun, Zhihui Xu, Jiyu Xie, Viktor Hesselberg-Thomsen, Taimeng Tan, Daoyue Zheng, Mikael L Strube, Anna Dragoš, Qirong Shen, Ruifu Zhang and 1 more

Abstract read
In one paragraph

Article in The ISME journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 193 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
193citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

193 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Root colonization by beneficial rhizobacteria.FEMS microbiology reviews · 2024
    Pooled it
  3. Plant signaling & behavior · 2026
    Article
  4. Article
  5. Virulence · 2026
    Article
  6. Article
  7. Plasma membrane HThe New phytologist · 2026
    Article
  8. Enhanced Endophytic Colonization of Flavobacterium Promotes Plant Resistance to Fusarium Wilt.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Growth-Promoting Effects ofPlants (Basel, Switzerland) · 2026
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

133 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Xinli Sun *Jiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Wastes, Educational Ministry Engineering Center of Resource-Saving Fertilizers, The Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing, Jiangsu, People's Republic of China.
Zhihui Xu *Jiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Wastes, Educational Ministry Engineering Center of Resource-Saving Fertilizers, The Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing, Jiangsu, People's Republic of China. xzh2068@njau.edu.cn.ORCID http://orcid.org/0000-0002-3987-8836
Jiyu XieJiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Wastes, Educational Ministry Engineering Center of Resource-Saving Fertilizers, The Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing, Jiangsu, People's Republic of China.
Viktor Hesselberg-ThomsenBacterial Interactions and Evolution Group, DTU Bioengineering, Technical University of Denmark, Kongens Lyngby, Denmark.ORCID http://orcid.org/0000-0001-6929-3671
Taimeng TanJiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Wastes, Educational Ministry Engineering Center of Resource-Saving Fertilizers, The Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing, Jiangsu, People's Republic of China.
Daoyue ZhengJiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Wastes, Educational Ministry Engineering Center of Resource-Saving Fertilizers, The Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing, Jiangsu, People's Republic of China.
Mikael L StrubeBacterial Ecophysiology and Biotechnology Group, DTU Bioengineering, Technical University of Denmark, Kongens Lyngby, Denmark.ORCID http://orcid.org/0000-0003-0905-5705
Anna DragošBacterial Interactions and Evolution Group, DTU Bioengineering, Technical University of Denmark, Kongens Lyngby, Denmark.ORCID http://orcid.org/0000-0003-4136-986X
Qirong ShenJiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Wastes, Educational Ministry Engineering Center of Resource-Saving Fertilizers, The Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing, Jiangsu, People's Republic of China.ORCID http://orcid.org/0000-0002-5662-9620
Ruifu ZhangJiangsu Provincial Key Lab of Solid Organic Waste Utilization, Jiangsu Collaborative Innovation Center of Solid Organic Wastes, Educational Ministry Engineering Center of Resource-Saving Fertilizers, The Key Laboratory of Plant Immunity, Nanjing Agricultural University, Nanjing, Jiangsu, People's Republic of China. rfzhang@njau.edu.cn.ORCID http://orcid.org/0000-0002-3334-4286
Ákos T KovácsBacterial Interactions and Evolution Group, DTU Bioengineering, Technical University of Denmark, Kongens Lyngby, Denmark.ORCID http://orcid.org/0000-0002-4465-1636

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Trophic interactions play a central role in driving microbial community assembly and function. In gut or soil ecosystems, successful inoculants are always facilitated by efficient colonization; however, the metabolite exchanges between inoculants and resident bacteria are rarely studied, particularly in the rhizosphere. Here, we used bioinformatic, genetic, transcriptomic, and metabonomic analyses to uncover syntrophic cooperation between inoculant (Bacillus velezensis SQR9) and plant-beneficial indigenous Pseudomonas stutzeri in the cucumber rhizosphere. We found that the synergistic interaction of these two species is highly environmental dependent, the emergence of syntrophic cooperation was only evident in a static nutrient-rich niche, such as pellicle biofilm in addition to the rhizosphere. Our results identified branched-chain amino acids (BCAAs) biosynthesis pathways are involved in syntrophic cooperation. Genome-scale metabolic modeling and metabolic profiling also demonstrated metabolic facilitation among the bacterial strains. In addition, biofilm matrix components from Bacillus were essential for the interaction. Importantly, the two-species consortium promoted plant growth and helped plants alleviate salt stress. In summary, we propose a mechanism in which synergic interactions between a biocontrol bacterium and a partner species promote plant health.

Indexed as

BacillusMicrobiotaPseudomonas stutzeriPlant RootsRhizosphereSoil Microbiology

Identifiers

PMID34593997
PMCPMC8483172

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.