ArticleApplied and environmental microbiology2021
A High-Throughput Short Sequence Typing Scheme for Serratia marcescens Pure Culture and Environmental DNA.
Article in Applied and environmental microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
10 citing papers in PubMed.
- Ecological dynamics of three persistent opportunistic pathogens in hospital sinks and their potential antagonistic bacteria.mSystems · 2026Article
- Cultivation and sequencing-free protocol foriScience · 2024Article
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- How many do we need? Meeting the challenges of studying the microbiome of a cryptic insect in an orchard.Frontiers in microbiology · 2024Article
- High-Throughput Short Sequence Typing Schemes forMicroorganisms · 2023Article
- Serratia marcescens Colonization in a Neonatal Intensive Care Unit Has Multiple Sources, with Sink Drains as a Major Reservoir.Applied and environmental microbiology · 2023Article
- Discrepancies between prokaryotes and eukaryotes need to be considered in soil DNA-based studies.Environmental microbiology · 2022Review
- Article
- Article
- Intestinal Dominance byMicroorganisms · 2021Article
Corrections and comments
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Authors and funding
8 authors.
Funding
Abstract
Molecular typing methods are used to characterize the relatedness between bacterial isolates involved in infections. These approaches rely mostly on discrete loci or whole-genome sequencing (WGS) analyses of pure cultures. On the other hand, their application to environmental DNA profiling to evaluate epidemiological relatedness among patients and environments has received less attention. We developed a specific, high-throughput short sequence typing (HiSST) method for the opportunistic human pathogen Serratia marcescens. Genes displaying the highest polymorphism were retrieved from the core genome of 60 S. marcescens strains. Bioinformatics analyses showed that use of only three loci (within
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Registered trials
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