Evidence map›Paper›PMID 34586901›Full record

ArticleApplied and environmental microbiology2021

Ecological Dichotomies Arise in Microbial Communities Due to Mixing of Deep Hydrothermal Waters and Atmospheric Gas in a Circumneutral Hot Spring.

Maria C Fernandes-Martins, Lisa M Keller, Mason Munro-Ehrlich, Kathryn R Zimlich, Madelyn K Mettler, Alexis M England, Rita Clare, Kevin Surya, Everett L Shock, Daniel R Colman and 1 more

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
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  11. Article
  12. Parapatric speciation ofFrontiers in microbiology · 2023
    Article
  13. Deep-branching acetogens in serpentinized subsurface fluids of Oman.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Maria C Fernandes-Martins *Department of Microbiology and Cell Biology, Montana State Universitygrid.41891.35, Bozeman, Montana, USA.
Lisa M Keller *Department of Microbiology and Cell Biology, Montana State Universitygrid.41891.35, Bozeman, Montana, USA.
Mason Munro-EhrlichDepartment of Microbiology and Cell Biology, Montana State Universitygrid.41891.35, Bozeman, Montana, USA.
Kathryn R ZimlichDepartment of Microbiology and Cell Biology, Montana State Universitygrid.41891.35, Bozeman, Montana, USA.
Madelyn K MettlerDepartment of Chemical and Biological Engineering, Montana State Universitygrid.41891.35, Bozeman, Montana, USA.
Alexis M EnglandDepartment of Microbiology and Cell Biology, Montana State Universitygrid.41891.35, Bozeman, Montana, USA.
Rita ClareDepartment of Chemistry and Biochemistry, Montana State Universitygrid.41891.35, Bozeman, Montana, USA.
Kevin SuryaDepartment of Microbiology and Cell Biology, Montana State Universitygrid.41891.35, Bozeman, Montana, USA.
Everett L ShockSchool of Molecular Sciences, Arizona State Universitygrid.215654.1, Tempe, Arizona, USA.
Daniel R ColmanDepartment of Microbiology and Cell Biology, Montana State Universitygrid.41891.35, Bozeman, Montana, USA.
Eric S BoydDepartment of Microbiology and Cell Biology, Montana State Universitygrid.41891.35, Bozeman, Montana, USA.ORCID 0000-0003-4436-5856

Funding

Department of Energy CSP 504081National Science Foundation (NSF) EAR-1820658
6 · The paper itself

Abstract

Little is known of how the confluence of subsurface and surface processes influences the assembly and habitability of hydrothermal ecosystems. To address this knowledge gap, the geochemical and microbial composition of a high-temperature, circumneutral hot spring in Yellowstone National Park was examined to identify the sources of solutes and their effect on the ecology of microbial inhabitants. Metagenomic analysis showed that populations comprising planktonic and sediment communities are archaeal dominated, are dependent on chemical energy (chemosynthetic), share little overlap in their taxonomic composition, and are differentiated by their inferred use of/tolerance to oxygen and mode of carbon metabolism. The planktonic community is dominated by putative aerobic/aerotolerant autotrophs, while the taxonomic composition of the sediment community is more evenly distributed and comprised of anaerobic heterotrophs. These observations are interpreted to reflect sourcing of the spring by anoxic, organic carbon-limited subsurface hydrothermal fluids and ingassing of atmospheric oxygen that selects for aerobic/aerotolerant organisms that have autotrophic capabilities in the water column. Autotrophy and consumption of oxygen by the planktonic community may influence the assembly of the anaerobic and heterotrophic sediment community. Support for this inference comes from higher estimated rates of genome replication in planktonic populations than sediment populations, indicating faster growth in planktonic populations. Collectively, these observations provide new insight into how mixing of subsurface waters and atmospheric oxygen create dichotomy in the ecology of hot spring communities and suggest that planktonic and sediment communities may have been less differentiated taxonomically and functionally prior to the rise of oxygen at ∼2.4 billion years ago (Gya).

Indexed as

AtmosphereHot SpringsMicrobiotaCarbonMetagenomicsOxygenWyomingCarbonOxygenaerobicanaerobicarchaeaautotrophiccircumneutral hot springdissolved organic carbonheterotrophicoxygen availabilitysilicasubsurfaceYellowstone

Identifiers

PMID34586901
PMCPMC8579995

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.