Evidence map›Paper›PMID 34586879›Full record

ArticleMolecular biology of the cell2021

Selective destabilization of polypeptides synthesized from NMD-targeted transcripts.

Vincent Chu, Qing Feng, Yang Lim, Sichen Shao

Open access · greenAbstract read
In one paragraph

Article in Molecular biology of the cell, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 20 citations in OpenAlex.

  1. RiboScreenBiomedicines · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Vincent ChuDepartment of Cell Biology, Harvard Medical School, Blavatnik Institute, Boston, MA 02115.
Qing FengDepartment of Cell Biology, Harvard Medical School, Blavatnik Institute, Boston, MA 02115.
Yang LimDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School, Blavatnik Institute, Boston, MA 02115.
Sichen ShaoDepartment of Cell Biology, Harvard Medical School, Blavatnik Institute, Boston, MA 02115.
Harvard University · US

Funding

Decoding ribosome-triggered quality control mechanismsDP2GM137415 · NIGMS · HARVARD MEDICAL SCHOOL · PI SHAO, SICHEN · 2019 to 2019
$2.5M
NIGMS NIH HHS DP2 GM137415
6 · The paper itself

Abstract

The translation of mRNAs that contain a premature termination codon (PTC) generates truncated proteins that may have toxic dominant negative effects. Nonsense-mediated decay (NMD) is an mRNA surveillance pathway that degrades PTC-containing mRNAs to limit the production of truncated proteins. NMD activation requires a ribosome terminating translation at a PTC, but what happens to the polypeptides synthesized during the translation cycle needed to activate NMD is incompletely understood. Here, by establishing reporter systems that encode the same polypeptide sequence before a normal termination codon or PTC, we show that termination of protein synthesis at a PTC is sufficient to selectively destabilize polypeptides in mammalian cells. Proteasome inhibition specifically rescues the levels of nascent polypeptides produced from PTC-containing mRNAs within an hour, but also disrupts mRNA homeostasis within a few hours. PTC-terminated polypeptide destabilization is also alleviated by depleting the central NMD factor UPF1 or SMG1, the kinase that phosphorylates UPF1 to activate NMD, but not by inhibiting SMG1 kinase activity. Our results suggest that polypeptide degradation is linked to PTC recognition in mammalian cells and clarify a framework to investigate these mechanisms.

Indexed as

Codon, NonsenseCodon, TerminatorFlow CytometryGenes, ReporterHEK293 CellsHumansNonsense Mediated mRNA DecayPeptidesProteasome Endopeptidase ComplexProtein BiosynthesisProtein Serine-Threonine KinasesProtein StabilityRNA HelicasesRNA, MessengerTrans-ActivatorsCodon, NonsenseCodon, TerminatorPeptidesProteasome Endopeptidase ComplexProtein Serine-Threonine KinasesRNA HelicasesRNA, MessengerSMG1 protein, humanTrans-ActivatorsUPF1 protein, human

Identifiers

PMID34586879
PMCPMC8694075
OpenAlexW3204588746

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.