Evidence map›Paper›PMID 34585335›Full record

ArticleAnnals of biomedical engineering2021

A Study of Gene Expression, Structure, and Contractility of iPSC-Derived Cardiac Myocytes from a Family with Heart Disease due to LMNA Mutation.

Mehrsa Mehrabi, Tessa A Morris, Zixuan Cang, Cecilia H H Nguyen, Yutong Sha, Mira N Asad, Nyree Khachikyan, Taylor L Greene, Danielle M Becker, Qing Nie and 2 more

Open access · hybridAbstract read
In one paragraph

Article in Annals of biomedical engineering, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Cells · 2024
    Article
  5. Nuclear damage inMolecular biology of the cell · 2023
    Article
  6. Review
  7. Review
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 2 countries.

Mehrsa MehrabiDepartment of Biomedical Engineering, University of California, Irvine, CA, 92697, USA.
Tessa A MorrisUCI Edwards Lifesciences Foundation Cardiovascular Innovation and Research Center (CIRC), University of California, Irvine, CA, 92697, USA.
Zixuan CangDepartment of Mathematics and Developmental & Cell Biology, University of California, Irvine, CA, 92697, USA.
Cecilia H H NguyenGenetics & Genomics Division, Department of Pediatrics, School of Medicine, University of California, Irvine, CA, 92697, USA.
Yutong ShaDepartment of Mathematics and Developmental & Cell Biology, University of California, Irvine, CA, 92697, USA.
Mira N AsadDepartment of Biomedical Engineering, University of California, Irvine, CA, 92697, USA.
Nyree KhachikyanDepartment of Biomedical Engineering, University of California, Irvine, CA, 92697, USA.
Taylor L GreeneDepartment of Biomedical Engineering, University of California, Irvine, CA, 92697, USA.
Danielle M BeckerDepartment of Biomedical Engineering, University of California, Irvine, CA, 92697, USA.
Qing NieDepartment of Biomedical Engineering, University of California, Irvine, CA, 92697, USA.
Michael V ZaragozaDepartment of Biological Chemistry, School of Medicine, University of California, Irvine, CA, 92697, USA.
Anna GrosbergDepartment of Biomedical Engineering, University of California, Irvine, CA, 92697, USA. grosberg@uci.edu.ORCID http://orcid.org/0000-0002-8878-0843
University of California, Irvine · US

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Melanie Funes · 1994 to 2026
$57.9M
Uncover Strategies Used By Biological SystemsP50GM076516 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI NIE, QING · 2007 to 2016
$25.1M
Cardiac Functional and Structural Implications of Lamin A/C MutationsR01HL129008 · NHLBI · UNIVERSITY OF CALIFORNIA-IRVINE · PI GROSBERG, ANNA, ZARAGOZA, MICHAEL V · 2015 to 2019
$2.1M
Training Program in Cardiovascular Applied Research and EntrepreneurshipT32HL116270 · NHLBI · UNIVERSITY OF CALIFORNIA-IRVINE · PI HUGHES, CHRISTOPHER C. W. · 2013 to 2022
$1.6M
Quantifying Multi-Scale Architecture of Cardiac TissuesR03EB028605 · NIBIB · UNIVERSITY OF CALIFORNIA-IRVINE · PI GROSBERG, ANNA · 2021 to 2022
$142k
Division of Mathematical Sciences DMS1763272NCI NIH HHS P30 CA062203NHLBI NIH HHS R01 HL129008NHLBI NIH HHS T32 HL116270NIBIB NIH HHS R03 EB028605NIGMS NIH HHS P50 GM076516Simons Foundation (US) 594598
6 · The paper itself

Abstract

Genetic mutations to the Lamin A/C gene (LMNA) can cause heart disease, but the mechanisms making cardiac tissues uniquely vulnerable to the mutations remain largely unknown. Further, patients with LMNA mutations have highly variable presentation of heart disease progression and type. In vitro patient-specific experiments could provide a powerful platform for studying this phenomenon, but the use of induced pluripotent stem cell-derived cardiomyocytes (iPSC-CM) introduces heterogeneity in maturity and function thus complicating the interpretation of the results of any single experiment. We hypothesized that integrating single cell RNA sequencing (scRNA-seq) with analysis of the tissue architecture and contractile function would elucidate some of the probable mechanisms. To test this, we investigated five iPSC-CM lines, three controls and two patients with a (c.357-2A>G) mutation. The patient iPSC-CM tissues had significantly weaker stress generation potential than control iPSC-CM tissues demonstrating the viability of our in vitro approach. Through scRNA-seq, differentially expressed genes between control and patient lines were identified. Some of these genes, linked to quantitative structural and functional changes, were cardiac specific, explaining the targeted nature of the disease progression seen in patients. The results of this work demonstrate the utility of combining in vitro tools in exploring heart disease mechanics.

Indexed as

Gene ExpressionMyocardial ContractionAdultAgedCardiomyopathy, DilatedCell LineHumansInduced Pluripotent Stem CellsLamin Type AMiddle AgedMyocytes, CardiacLamin Type ALMNA protein, humanDisease presentationDysmorphic nucleiiPSC-derived cardiomyocyteLamin A/C mutation

Identifiers

PMID34585335
PMCPMC8671287
OpenAlexW3202877573

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.