Evidence map›Paper›PMID 34585280›Full record

ArticlePlanta2021

The co-expression of genes involved in seed coat and endosperm development promotes seed abortion in grapevine.

Shasha Li, Xiangyu Geng, Shuo Chen, Keke Liu, Saisai Yu, Xiping Wang, Chaohong Zhang, Jianxia Zhang, Yingqiang Wen, Qiangwei Luo and 2 more

Abstract read
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In one paragraph

Article in Planta, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Identification ofInternational journal of molecular sciences · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

Shasha LiCollege of Horticulture, Northwest A & F University, Yangling, 712100, Shaanxi, People's Republic of China.
Xiangyu GengCollege of Horticulture, Northwest A & F University, Yangling, 712100, Shaanxi, People's Republic of China.
Shuo ChenCollege of Horticulture, Northwest A & F University, Yangling, 712100, Shaanxi, People's Republic of China.
Keke LiuCollege of Horticulture, Northwest A & F University, Yangling, 712100, Shaanxi, People's Republic of China.
Saisai YuCollege of Horticulture, Northwest A & F University, Yangling, 712100, Shaanxi, People's Republic of China.
Xiping WangCollege of Horticulture, Northwest A & F University, Yangling, 712100, Shaanxi, People's Republic of China.
Chaohong ZhangCollege of Horticulture, Northwest A & F University, Yangling, 712100, Shaanxi, People's Republic of China.
Jianxia ZhangCollege of Horticulture, Northwest A & F University, Yangling, 712100, Shaanxi, People's Republic of China.
Yingqiang WenCollege of Horticulture, Northwest A & F University, Yangling, 712100, Shaanxi, People's Republic of China.
Qiangwei LuoResearch Institute of Xinjiang Grape, Melon and Fruit, Shanshan, 838200, Xinjiang, People's Republic of China.
Yan XuCollege of Horticulture, Northwest A & F University, Yangling, 712100, Shaanxi, People's Republic of China. yan.xu@nwsuaf.edu.cn.
Yuejin WangCollege of Horticulture, Northwest A & F University, Yangling, 712100, Shaanxi, People's Republic of China. wangyj@nwsuaf.edu.cn.ORCID http://orcid.org/0000-0002-6441-7564
Ministry of Agriculture · CZNorth West Agriculture and Forestry University · CNExperimental Center of Forestry in North China · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

MAIN

conclusionThe seed coat gene VviAGL11 coordinates with endosperm development genes FIS2, PHERESE1 and IKU2 and functions as the key regulator in seed development and abortion processes in grapevine. Seed development is essential for the reproduction of flowering plants. Seed abortion is a specific characteristic that produces seedless berries and is often observed in cultivated grapevines. Although seedlessness is an important trait for table and dried grapevine production, the mechanism of seed abortion remains poorly understood. This research aimed to analyze the co-expression of the seed coat development gene VviAGL11 and the endosperm development genes FERTILIZATION INDEPENDENT SEED2 (FIS2), PHERESE1 and HAIKU2 (IKU2) that regulate seedless fruit development in grapevine. The transcript levels of VviAGL11, FIS2, PHERESE1 and IKU2 all decreased during seed abortion in the seedless grape 'Thompson Seedless' plants, compared to those of the seeded grape 'Pinot Noir'. The transcript levels of the salicylic acid (SA)-dependent defense response genes EDS1, NPR1, NDR1 and SID2 were higher in 'Thompson Seedless' than 'Pinot Noir' during seed development. Also, WRKY3, WRKY6 and WRKY52, which participate in the SA pathway, were higher expressed in 'Thompson Seedless' than in 'Pinot Noir', indicating that SA-dependent defense responses may regulate seed abortion. The genes related to synthesis and metabolism of gibberellic acid (GA) and abscisic acid (ABA) also showed differential expression between 'Thompson Seedless' and 'Pinot Noir'. Exogenous applications of plant growth regulators (PGRs) to inflorescences of three stenospermocarpy grapevines before flowering showed that GA

Indexed as

Gene Expression Regulation, PlantVitisEndospermReproductionSeedsEndosperm developmentSeed abortionSeed coat developmentSeedlessnessStenospermocarpyVitis

Identifiers

PMID34585280
OpenAlexW3204772104

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.