Evidence map›Paper›PMID 34584977›Full record

ArticleJGH open : an open access journal of gastroenterology and hepatology2021

Genomic profiling of intestinal/mixed-type superficial non-ampullary duodenal epithelial tumors.

Shuichi Miyamoto, Goki Suda, Marin Ishikawa, Hideyuki Hayashi, Satoshi Nimura, Yoshihiro Matsuno, Ryo Mori, Shigeki Tanishima, Takahiko Kudo, Tomofumi Takagi and 4 more

Open access · goldAbstract read
In one paragraph

Article in JGH open : an open access journal of gastroenterology and hepatology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. YTHDF3 Promoted Gastric Cancer Progression by Facilitating mAnalytical cellular pathology (Amsterdam) · 2026
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 8 institutions in 1 country.

Shuichi MiyamotoDepartment of Gastroenterology Hakodate Municipal Hospital Hakodate Japan.ORCID https://orcid.org/0000-0001-6990-8920
Goki SudaDepartment of Gastroenterology and Hepatology Hokkaido University Graduate School of Medicine Sapporo Japan.ORCID https://orcid.org/0000-0003-0098-9106
Marin IshikawaDepartment of Gastroenterology and Hepatology Hokkaido University Graduate School of Medicine Sapporo Japan.
Hideyuki HayashiGenomics Unit, Keio Cancer Center Keio University School of Medicine Tokyo Japan.
Satoshi NimuraDepartment of Pathology Fukuoka University Chikushi Hospital Fukuoka Japan.
Yoshihiro MatsunoDepartment of Surgical Pathology Hokkaido University Hospital Sapporo Japan.
Ryo MoriDepartment of Biomedical Informatics Development Mitsubishi Space Software Co., Ltd. Tokyo Japan.
Shigeki TanishimaDepartment of Biomedical Informatics Development Mitsubishi Space Software Co., Ltd. Tokyo Japan.
Takahiko KudoDepartment of Gastroenterology and Hepatology Health Science University of Hokkaido Sapporo Japan.
Tomofumi TakagiDepartment of Gastroenterology Japan Community Health Care Organization Sapporo Hokushin Hospital Sapporo Japan.
Yoshiya YamamotoDepartment of Gastroenterology Hakodate Municipal Hospital Hakodate Japan.
Shoko OnoDepartment of Gastroenterology and Hepatology Hokkaido University Graduate School of Medicine Sapporo Japan.ORCID https://orcid.org/0000-0002-4485-6367
Yuichi ShimizuDepartment of Gastroenterology and Hepatology Hokkaido University Graduate School of Medicine Sapporo Japan.
Naoya SakamotoDepartment of Gastroenterology and Hepatology Hokkaido University Graduate School of Medicine Sapporo Japan.
Hokkaido University · JPMitsubishi Space Software (Japan) · JPFukuoka University · JPHakodate National Hospital · JPHokkaido University Hospital · JPHokkaido University of Science · JPHokushin General Hospital · JPKeio University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimThe mechanism underlying carcinogenesis and the genomic features of superficial non-ampullary duodenal epithelial tumors (SNADETs) have not been elucidated in detail. In this study, we examined the genomic features of incipient SNADETs, such as small lesions resected via endoscopic treatment, using next-generation sequencing (NGS).

methodsTwenty consecutive patients who underwent endoscopic treatment for SNADETs of less than 20 mm between January and December 2017 were enrolled. Targeted genomic sequencing was performed through NGS using a panel of 160 cancer-related genes. Furthermore, the alteration/mutation frequencies in SNADETs were examined.

resultsThe maximum size of the SNADETs examined in this study was 12 mm in diameter. Five SNADETs were classified as low-grade dysplasia (LGD) tumors, while 14 SNADETs were classified as high-grade dysplasia tumors. Only one carcinoma in situ was detected. NGS data for 16 samples were obtained. APC alterations were detected in 81% of samples (13/16). KRAS, BRAF, and TP53 alterations were detected in 25% (4/16), 18.8% (3/16), and 6.3% (1/16) of cases, respectively.

conclusionWe detected

Indexed as

duodenal cancergenomic testingnext‐generation sequencingsuperficial non‐ampullary duodenal epithelial tumor

Identifiers

PMID34584977
PMCPMC8454473
OpenAlexW3190772685

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.