Evidence map›Paper›PMID 34581845›Full record

ArticleApplied microbiology and biotechnology2021

Recombinant production and characterisation of two chitinases from Rasamsonia emersonii, and assessment of their potential industrial applicability.

Kelly Dwyer, Ian S Bentley, Emma Tighe, Eibhilin McGleenan, Darragh Gaffney, Gary Walsh

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In one paragraph

Article in Applied microbiology and biotechnology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 22 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Kelly DwyerMBio Labs, Monaghan Mushrooms Ireland Ultd, Tyholland, Monaghan, Ireland. dwyerkel@gmail.com.ORCID http://orcid.org/0000-0002-8960-1712
Ian S BentleyMBio Labs, Monaghan Mushrooms Ireland Ultd, Tyholland, Monaghan, Ireland.
Emma TigheMBio Labs, Monaghan Mushrooms Ireland Ultd, Tyholland, Monaghan, Ireland.
Eibhilin McGleenanMBio Labs, Monaghan Mushrooms Ireland Ultd, Tyholland, Monaghan, Ireland.
Darragh GaffneyMBio Labs, Monaghan Mushrooms Ireland Ultd, Tyholland, Monaghan, Ireland.
Gary WalshChemical Sciences Department, University of Limerick, Castletroy, Limerick, Ireland. gary.walsh@ul.ie.ORCID http://orcid.org/0000-0002-1300-8314
Monaghan Biosciences (Ireland) · IEUniversity of Limerick · IE

Funding

Irish Research Council EBPPG/2014/13
6 · The paper itself

Abstract

Rasamsonia emersonii (previously Talaromyces emersonii) is a thermophilic filamentous fungus displaying optimum growth at 45 °C. It has a history of use in commercial food enzyme production. Its unfractionated chitinolytic secretome was partially characterised in the early 1990s; however, no individual chitinase from this source has been described in literature previously. This study describes two GH18 chitinases originating from the R. emersonii genome, expressed in the methylotrophic yeast P. pastoris. Chit1 comprises of a GH18 catalytic domain and Chit2 comprises of a GH18 catalytic domain and a chitin-binding motif at the C-terminal. The chitinases were expressed as glycoproteins. The apparent molecular weight of Chit1 was 35.8-42.1 kDa with a smearing tail associated with glyco-sidechains visible up to 72.2 kDa. This became two bands of 30.8 and 29.0 kDa upon de-glycosylation. The apparent molecular weight of Chit2 was 50.4 kDa, reducing to 48.2 kDa upon de-glycosylation. Both chitinases displayed endo-chitinase and chitobiosidase activity, temperature optima of 50-55 °C and low pH optima (pH 4.5 or lower); Chit1 displayed a pH optimum of 3.5, retaining > 60% maximum activity at pH 2.2, a pH range lower than most enzymes of fungal origin. Chit2 displayed the highest chitin-degrading ability at 3456 µmol/mg on 4-NP-triacetylchitotriose, but lost activity faster than Chit1, which displayed 403 µmol/mg on the same substrate. The predicted D values (time required to reduce the enzyme activity to 10% of its original value at 50 °C) were 19.2 and 2.3 days for Chit1 and Chit2, respectively. Thus, Chit1 can be considered one of few hyperthermostable chitinase enzymes described in literature to date. Their physicochemical properties render these chitinases likely suitable for shrimp chitin processing including one-step chitin hydrolysis and alternative sustainable protein processing and the attractive emerging application of mushroom food waste valorisation.Key points• Two GH18 chitinases originating from the industrially relevant thermophilic fungus R. emersonii were cloned and expressed in P. pastoris.• The purified recombinant chitinases showed low pH and high temperature optima and appreciable thermostability at industrially relevant temperatures.• The chitinases displayed characteristics that indicate their likely suitability to several industrial applications including sustainable alternative protein processing, food waste valorisation of commercial mushroom production and one-step shrimp chitin processing.

Indexed as

ChitinasesRefuse DisposalChitinEurotialesFoodIndustrial MicrobiologyRecombinant ProteinsChitinChitinasesRecombinant ProteinsChitin waste valorisationChitooligosaccharidesFungal chitinaseGH18GlucosamineRasamsonia emersoniiSustainable protein processingThermostable chitinase

Identifiers

PMID34581845
OpenAlexW3202385881

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.