Evidence map›Paper›PMID 34581812›Full record

ArticleNucleic acids research2021

Nucleolar TFIIE plays a role in ribosomal biogenesis and performance.

Tamara Phan, Pallab Maity, Christina Ludwig, Lisa Streit, Jens Michaelis, Miltiadis Tsesmelis, Karin Scharffetter-Kochanek, Sebastian Iben

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Characterization of TFIIE-regulated genes by transcriptome analysis.Turkish journal of biology = Turk biyoloji dergisi · 2024
    Article
  8. Article
  9. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Tamara PhanDepartment of Dermatology and Allergic Diseases, Ulm University, Ulm, Baden-Württemberg, 89081 Germany.
Pallab MaityDepartment of Dermatology and Allergic Diseases, Ulm University, Ulm, Baden-Württemberg, 89081 Germany.
Christina LudwigBavarian Center for Biomolecular Mass Spectrometry, Technical University Munich, Freising, Bavaria 85354, Germany.
Lisa StreitInstitute of Biophysics, Ulm University, Ulm, Baden-Württemberg 89081, Germany.
Jens MichaelisInstitute of Biophysics, Ulm University, Ulm, Baden-Württemberg 89081, Germany.
Miltiadis TsesmelisInstitute of Physiological Chemistry, Ulm University, Ulm, Baden-Württemberg 89081, Germany.
Karin Scharffetter-KochanekDepartment of Dermatology and Allergic Diseases, Ulm University, Ulm, Baden-Württemberg, 89081 Germany.
Sebastian IbenDepartment of Dermatology and Allergic Diseases, Ulm University, Ulm, Baden-Württemberg, 89081 Germany.ORCID 0000-0002-5207-2861
Universität Ulm · DETechnical University of Munich · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ribosome biogenesis is a highly energy-demanding process in eukaryotes which requires the concerted action of all three RNA polymerases. In RNA polymerase II transcription, the general transcription factor TFIIH is recruited by TFIIE to the initiation site of protein-coding genes. Distinct mutations in TFIIH and TFIIE give rise to the degenerative disorder trichothiodystrophy (TTD). Here, we uncovered an unexpected role of TFIIE in ribosomal RNA synthesis by RNA polymerase I. With high resolution microscopy we detected TFIIE in the nucleolus where TFIIE binds to actively transcribed rDNA. Mutations in TFIIE affects gene-occupancy of RNA polymerase I, rRNA maturation, ribosomal assembly and performance. In consequence, the elevated translational error rate with imbalanced protein synthesis and turnover results in an increase in heat-sensitive proteins. Collectively, mutations in TFIIE-due to impaired ribosomal biogenesis and translational accuracy-lead to a loss of protein homeostasis (proteostasis) which can partly explain the clinical phenotype in TTD.

Indexed as

Gene Expression RegulationOrganelle BiogenesisCell Line, TransformedCell NucleolusFibroblastsGenes, ReporterHot TemperatureHumansLuciferasesMutationProteasome Endopeptidase ComplexProtein BiosynthesisProtein StabilityProteostasisRibosomesRNA Polymerase ILuciferasesProteasome Endopeptidase ComplexRNA Polymerase IRNA, RibosomalTranscription Factors, TFIItranscription factor TFIIETranscription Factor TFIIH

Identifiers

PMID34581812
PMCPMC8565312
OpenAlexW3203962273

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.