Evidence map›Paper›PMID 34581724›Full record

ArticleThe Journal of general physiology2021

EVAP: A two-photon imaging tool to study conformational changes in endogenous Kv2 channels in live tissues.

Parashar Thapa, Robert Stewart, Rebecka J Sepela, Oscar Vivas, Laxmi K Parajuli, Mark Lillya, Sebastian Fletcher-Taylor, Bruce E Cohen, Karen Zito, Jon T Sack

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Parashar Thapa *Department of Physiology and Membrane Biology, University of California, Davis, Davis, CA.ORCID 0000-0001-8499-3449
Robert Stewart *Department of Physiology and Membrane Biology, University of California, Davis, Davis, CA.
Rebecka J SepelaDepartment of Physiology and Membrane Biology, University of California, Davis, Davis, CA.ORCID 0000-0002-2446-3339
Oscar VivasCenter for Neuroscience, University of California, Davis, Davis, CA.ORCID 0000-0002-0964-385X
Laxmi K ParajuliCenter for Neuroscience, University of California, Davis, Davis, CA.
Mark LillyaDepartment of Physiology and Membrane Biology, University of California, Davis, Davis, CA.
Sebastian Fletcher-TaylorDepartment of Physiology and Membrane Biology, University of California, Davis, Davis, CA.
Bruce E CohenThe Molecular Foundry, Lawrence Berkeley National Laboratory, Berkeley, CA.ORCID 0000-0003-3655-3638
Karen ZitoCenter for Neuroscience, University of California, Davis, Davis, CA.
Jon T Sack *Department of Physiology and Membrane Biology, University of California, Davis, Davis, CA.ORCID 0000-0002-6975-982X
University of California, Davis · USLawrence Berkeley National Laboratory · US

Funding

UC Davis MCB T32 Administrative Supplement to Recognize Excellence in Diversity, Equity, Inclusion, and Accessibility (DEIA) MentorshipT32GM007377 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI CHEDIN, FREDERIC LOUIS · 1985 to 2023
$9.9M
Mechanisms of Dendritic Spine EliminationR01NS062736 · NINDS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI ZITO, KAREN · 2009 to 2019
$3.8M
Genetically Encoded Reporters of Integrated Neural Activity for Functional Mapping of Neural Circuitry-Administrative SupplementU01NS090581 · NINDS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI LAM, KIT S, TRIMMER, JAMES S · 2014 to 2016
$2.2M
Large-scale analysis of functional synapses during circuit plasticity with novel optogenetic sensorsU01NS103571 · NINDS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI TIAN, LIN, ZITO, KAREN · 2017 to 2019
$1.7M
Visualizing endogenous ion channel activationR01NS096317 · NINDS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI COHEN, BRUCE E, SACK, JON THOMAS · 2016 to 2019
$1.4M
Neuronal voltage tracers for photoacoustic imaging in the deep brainR21EY026449 · NEI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI SACK, JON THOMAS · 2015 to 2016
$459k
Endogenous Ion Channel Activity Tracers to Monitor the Involvement of Kv2 Channels During Ischemic AttackF31NS108614 · NINDS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI SEPELA, REBECKA JANE · 2019 to 2021
$105k
American Heart Association-American Stroke Association 17POST33670698NEI NIH HHS R21 EY026449NIGMS NIH HHS T32 GM007377NIH HHS R01NS096317NINDS NIH HHS F31 NS108614NINDS NIH HHS R01 NS062736NINDS NIH HHS R01 NS096317NINDS NIH HHS U01 NS090581NINDS NIH HHS U01 NS103571
6 · The paper itself

Abstract

A primary goal of molecular physiology is to understand how conformational changes of proteins affect the function of cells, tissues, and organisms. Here, we describe an imaging method for measuring the conformational changes of the voltage sensors of endogenous ion channel proteins within live tissue, without genetic modification. We synthesized GxTX-594, a variant of the peptidyl tarantula toxin guangxitoxin-1E, conjugated to a fluorophore optimal for two-photon excitation imaging through light-scattering tissue. We term this tool EVAP (Endogenous Voltage-sensor Activity Probe). GxTX-594 targets the voltage sensors of Kv2 proteins, which form potassium channels and plasma membrane-endoplasmic reticulum junctions. GxTX-594 dynamically labels Kv2 proteins on cell surfaces in response to voltage stimulation. To interpret dynamic changes in fluorescence intensity, we developed a statistical thermodynamic model that relates the conformational changes of Kv2 voltage sensors to degree of labeling. We used two-photon excitation imaging of rat brain slices to image Kv2 proteins in neurons. We found puncta of GxTX-594 on hippocampal CA1 neurons that responded to voltage stimulation and retain a voltage response roughly similar to heterologously expressed Kv2.1 protein. Our findings show that EVAP imaging methods enable the identification of conformational changes of endogenous Kv2 voltage sensors in tissue.

Indexed as

Shab Potassium ChannelsSpider VenomsAnimalsCarrier ProteinsHippocampusNeuronsRatsCarrier ProteinsShab Potassium ChannelsSpider Venoms

Identifiers

PMID34581724
PMCPMC8480965
OpenAlexW3202183823

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.