Evidence map›Paper›PMID 34581467›Full record

ArticleMolecular microbiology2021

Motility control through an anti-activation mechanism in Agrobacterium tumefaciens.

Melene A Alakavuklar, Brynn C Heckel, Ari M Stoner, Joseph A Stembel, Clay Fuqua

Abstract read
In one paragraph

Article in Molecular microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Melene A AlakavuklarIndiana University, Bloomington, Indiana, USA.
Brynn C HeckelIndiana University, Bloomington, Indiana, USA.
Ari M StonerIndiana University, Bloomington, Indiana, USA.
Joseph A StembelIndiana University, Bloomington, Indiana, USA.
Clay FuquaIndiana University, Bloomington, Indiana, USA.ORCID 0000-0001-7051-1760

Funding

Biosynthesis and regulation of a unipolar polysaccharide in AgrobacteriumR01GM120337 · NIGMS · TRUSTEES OF INDIANA UNIVERSITY · PI FUQUA, WILLIAM C · 2017 to 2020
$1.4M
NIGMS NIH HHS R01 GM120337
6 · The paper itself

Abstract

Many bacteria can migrate from a free-living, planktonic state to an attached, biofilm existence. One factor regulating this transition in the facultative plant pathogen Agrobacterium tumefaciens is the ExoR-ChvG-ChvI system. Periplasmic ExoR regulates the activity of the ChvG-ChvI two-component system in response to environmental stress, most notably low pH. ChvI impacts hundreds of genes, including those required for type VI secretion, virulence, biofilm formation, and flagellar motility. Previous studies revealed that activated ChvG-ChvI represses expression of most of class II and class III flagellar biogenesis genes, but not the master motility regulator genes visN, visR, and rem. In this study, we characterized the integration of the ExoR-ChvG-ChvI and VisNR-Rem pathways. We isolated motile suppressors of the non-motile ΔexoR mutant and thereby identified the previously unannotated mirA gene encoding a 76 amino acid protein. We report that the MirA protein interacts directly with the Rem DNA-binding domain, sequestering Rem and preventing motility gene activation. The ChvG-ChvI pathway activates mirA expression and elevated mirA is sufficient to block motility. This study reveals how the ExoR-ChvG-ChvI pathway prevents flagellar motility in A. tumefaciens. MirA is also conserved among other members of the Rhizobiales suggesting similar mechanisms of motility regulation.

Indexed as

Gene Expression Regulation, BacterialStress, PhysiologicalAgrobacterium tumefaciensAmino Acid SequenceBacterial Outer Membrane ProteinsBacterial ProteinsGenes, BacterialProtein BindingProtein KinasesTranscription FactorsVirulenceBacterial Outer Membrane ProteinsBacterial ProteinschvG protein, BacteriachvI protein, BacteriaProtein KinasesTranscription Factorsacid stressflagellagene regulationoverlapping regulonsprotein-protein interaction

Identifiers

PMID34581467
PMCPMC8690355

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.