Evidence map›Paper›PMID 34580592›Full record

ArticleStem cells international2021

Intestinal Organoids in Colitis Research: Focusing on Variability and Cryopreservation.

Talke F Zur Bruegge, Andrea Liese, Sören Donath, Stefan Kalies, Maike Kosanke, Oliver Dittrich-Breiholz, Sandra Czech, Verena N Bauer, André Bleich, Manuela Buettner

Abstract read
In one paragraph

Article in Stem cells international, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Talke F Zur BrueggeInstitute for Laboratory Animal Science, Hannover Medical School, Hannover, Germany.ORCID https://orcid.org/0000-0003-0563-0389
Andrea LieseInstitute for Laboratory Animal Science, Hannover Medical School, Hannover, Germany.
Sören DonathInstitute of Quantum Optics, Leibniz University Hannover, Hannover, Germany.
Stefan KaliesInstitute of Quantum Optics, Leibniz University Hannover, Hannover, Germany.
Maike KosankeResearch Core Unit Genomics, Hannover Medical School, 30625 Hannover, Germany.
Oliver Dittrich-BreiholzResearch Core Unit Genomics, Hannover Medical School, 30625 Hannover, Germany.
Sandra CzechInstitute for Laboratory Animal Science, Hannover Medical School, Hannover, Germany.
Verena N BauerInstitute for Laboratory Animal Science, Hannover Medical School, Hannover, Germany.
André BleichInstitute for Laboratory Animal Science, Hannover Medical School, Hannover, Germany.
Manuela BuettnerInstitute for Laboratory Animal Science, Hannover Medical School, Hannover, Germany.ORCID https://orcid.org/0000-0003-4351-6333

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In recent years, stem cell-derived organoids have become a cell culture standard that is widely used for studying various scientific issues that were previously investigated through animal experiments and using common tumor cell lines. After their initial hype, concerns regarding their standardization have been raised. Here, we aim to provide some insights into our experience in standardizing murine colonic epithelial organoids, which we use as a replacement method for research on inflammatory bowel disease. Considering good scientific practice, we examined various factors that might challenge the design and outcome of experiments using these organoids. First, to analyze the impact of antibiotics/antimycotics, we performed kinetic experiments using ZellShield® and measured the gene expression levels of the tight junction markers

Identifiers

PMID34580592
PMCPMC8464427

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.