Evidence map›Paper›PMID 34578230›Full record

ArticlePathogens (Basel, Switzerland)2021

Complete Genome Sequencing of

Siti Roszilawati Ramli, Boyke Bunk, Cathrin Spröer, Robert Geffers, Michael Jarek, Sabin Bhuju, Marga Goris, Sahlawati Mustakim, Frank Pessler

Open access · goldAbstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.1field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Whole genome sequencing data ofData in brief · 2024
    Article
  5. Comparative genomics ofFrontiers in microbiology · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Siti Roszilawati RamliResearch Group Biomarkers for Infectious Diseases, Helmholtz Centre for Infection Research, 38124 Braunschweig, Germany.
Boyke BunkLeibniz Institute German Collection of Microorganisms and Cell Cultures (DSMZ), 38124 Braunschweig, Germany.ORCID 0000-0002-8420-8161
Cathrin SpröerLeibniz Institute German Collection of Microorganisms and Cell Cultures (DSMZ), 38124 Braunschweig, Germany.
Robert GeffersGenome Analytics, Helmholtz Centre for Infection Research, 38124 Braunschweig, Germany.
Michael JarekGenome Analytics, Helmholtz Centre for Infection Research, 38124 Braunschweig, Germany.
Sabin BhujuGenome Analytics, Helmholtz Centre for Infection Research, 38124 Braunschweig, Germany.
Marga GorisLeptospirosis Reference Centre, Amsterdam Medical Centre, University of Amsterdam, 1100 DD Amsterdam, The Netherlands.
Sahlawati MustakimDepartment of Pathology, Hospital Tuanku Ampuan Rahimah, Klang 41672, Malaysia.
Frank PesslerResearch Group Biomarkers for Infectious Diseases, Helmholtz Centre for Infection Research, 38124 Braunschweig, Germany.ORCID 0000-0002-3434-2311
Helmholtz Centre for Infection Research · DELeibniz Institute DSMZ – German Collection of Microorganisms and Cell Cultures · DETengku Ampuan Rahimah Hospital · MYUniversity of Amsterdam · NL

Funding

Ministry of Health, Malaysia KKM510-4/4/3/3Jld.4(85)
6 · The paper itself

Abstract

The ability of Leptospirae to persist in environments and animal hosts but to cause clinically highly variable disease in humans has made leptospirosis the most common zoonotic disease. Considering the paucity of data on variation in complete genomes of human pathogenic Leptospirae, we have used a combination of Single Molecule Real-Time (SMRT) and Illumina sequencing to obtain complete genome sequences of six human clinical

Indexed as

biomarkerclassificationgeneticsgenomegenome rearrangementLeptospiraLeptospira interrogansleptospirosisrfb locusvirulencewhole genome

Identifiers

PMID34578230
PMCPMC8467490
OpenAlexW3199871585

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.