Evidence map›Paper›PMID 34577598›Full record

ArticlePharmaceuticals (Basel, Switzerland)2021

RTK25: A Comprehensive Molecular Profiling Strategy in Cholangiocarcinoma Using an Integrated Bioinformatics Approach.

Brinda Balasubramanian, Simran Venkatraman, Tavan Janvilisri, Tuangporn Suthiphongchai, Siriporn Jitkaew, Jittiyawadee Sripa, Rutaiwan Tohtong

Open access · goldAbstract read
In one paragraph

Article in Pharmaceuticals (Basel, Switzerland), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Brinda BalasubramanianGraduate Program in Molecular Medicine, Faculty of Science, Mahidol University, Bangkok 10400, Thailand.ORCID 0000-0003-4808-9748
Simran VenkatramanGraduate Program in Molecular Medicine, Faculty of Science, Mahidol University, Bangkok 10400, Thailand.ORCID 0000-0002-2037-0952
Tavan JanvilisriDepartment of Biochemistry, Faculty of Science, Mahidol University, Bangkok 10400, Thailand.ORCID 0000-0002-6376-5575
Tuangporn SuthiphongchaiDepartment of Biochemistry, Faculty of Science, Mahidol University, Bangkok 10400, Thailand.
Siriporn JitkaewAge-Related Inflammation and Degeneration Research Unit, Department of Clinical Chemistry, Faculty of Allied Health Sciences, Chulalongkorn University, Bangkok 10330, Thailand.ORCID 0000-0002-7931-2319
Jittiyawadee SripaCollege of Medicine and Public Health, Ubon Ratchathani University, Ubon Ratchathani 34190, Thailand.
Rutaiwan TohtongDepartment of Biochemistry, Faculty of Science, Mahidol University, Bangkok 10400, Thailand.ORCID 0000-0003-3670-1004
Mahidol University · THChulalongkorn University · THUbon Ratchathani University · TH

Funding

Mahidol University Fiscal year 2021
6 · The paper itself

Abstract

Cholangiocarcinoma (CCA) is a heterogeneous group of malignancies that primarily originate from the bile duct. Tumor heterogeneity is a prime characteristic of CCA and considering the scarcity of approved targeted therapy drugs, this makes precision oncology impractical in CCA. Stratifying patients based on their molecular signature and biomarker-guided therapy may offer a conducive solution. Receptors tyrosine kinases (RTK) are potential targets for novel therapeutic strategies in CCA as RTK signaling is dysregulated in CCA. This study aims to identify targetable RTK profile in CCA using a bioinformatic approach. We discovered that CCA samples could be grouped into molecular subtypes based on the gene expression profile of selected RTKs (RTK25). Using the RTK25 gene list, we discovered five distinct molecular subtypes of CCA in this cohort. Tyrosine kinase inhibitors that target each RTK profile and their subsequent molecular signatures were also discovered. These results suggest that certain RTKs correlate with each other, indicating that tailored dual inhibition of RTKs may be more favorable than monotherapy. The results from this study can direct future investigative attention towards validating this concept in in vivo and in vitro systems. Ultimately, this will facilitate biomarker-guided clinical trials for the successful approval of novel therapeutic options in CCA.

Indexed as

biomarkerscholangiocarcinomaprecision medicinereceptor tyrosine kinasestargeted therapy

Identifiers

PMID34577598
PMCPMC8469883
OpenAlexW3196310537

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.