Evidence map›Paper›PMID 34574767›Full record

ArticleInternational journal of environmental research and public health2021

Discrepancies in Infectivity of Flavivirus and SARS-CoV-2 Clinical Samples: An Improved Assay for Infectious Virus Shedding and Viremia Assessment.

Mizuki Fukuta, Co Thach Nguyen, Thi Thu Thuy Nguyen, Thi Thanh Ngan Nguyen, Thi Bich Hau Vu, Taichiro Takemura, Le Khanh Hang Nguyen, Shingo Inoue, Kouichi Morita, Thi Quynh Mai Le and 2 more

Open access · goldAbstract read
In one paragraph

Article in International journal of environmental research and public health, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.0field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 2 institutions in 2 countries.

Mizuki FukutaGraduate School of Biomedical Sciences, Nagasaki University, Nagasaki 852-8523, Japan.
Co Thach NguyenNational Institute of Hygiene and Epidemiology, Hanoi 10000, Vietnam.
Thi Thu Thuy NguyenNational Institute of Hygiene and Epidemiology, Hanoi 10000, Vietnam.
Thi Thanh Ngan NguyenGraduate School of Biomedical Sciences, Nagasaki University, Nagasaki 852-8523, Japan.
Thi Bich Hau VuNational Institute of Hygiene and Epidemiology, Hanoi 10000, Vietnam.
Taichiro TakemuraGraduate School of Biomedical Sciences, Nagasaki University, Nagasaki 852-8523, Japan.
Le Khanh Hang NguyenNational Institute of Hygiene and Epidemiology, Hanoi 10000, Vietnam.
Shingo InoueGraduate School of Biomedical Sciences, Nagasaki University, Nagasaki 852-8523, Japan.
Kouichi MoritaGraduate School of Biomedical Sciences, Nagasaki University, Nagasaki 852-8523, Japan.
Thi Quynh Mai LeNational Institute of Hygiene and Epidemiology, Hanoi 10000, Vietnam.
Futoshi HasebeGraduate School of Biomedical Sciences, Nagasaki University, Nagasaki 852-8523, Japan.
Meng Ling MoiGraduate School of Biomedical Sciences, Nagasaki University, Nagasaki 852-8523, Japan.ORCID 0000-0002-8103-6659
Nagasaki University · JPNational Institute Of Hygiene And Epidemiology · VN

Funding

Japan Agency for Medical Research and Development
6 · The paper itself

Abstract

Infectivity and neutralizing antibody titers of flavivirus and severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) are frequently measured using the conventional plaque assay. While the assay is useful in the determination of infectivity, conventional plaque assays generally possess lower sensitivity and are time-consuming compared to nucleic acid amplification tests. In this study, a microcrystalline cellulose (MCC), Avicel, was evaluated as an alternative to the conventional virus overlay medium, methylcellulose, for a plaque assay. The plaque assay was performed using dengue and COVID-19 clinical samples and laboratory-established flavivirus and SARS-CoV-2 strains. In virus titration of clinical samples, the plaques were significantly larger, and the virus titers were higher when Avicel MCC-containing overlay medium was used than with conventional methylcellulose overlay medium. In addition, for some clinical samples and laboratory virus strains, infectious particles were detected as plaques in the Avicel MCC-containing medium, but not in the conventional methylcellulose medium. The results suggest that the viremia titer determined using the new overlay medium containing Avicel MCC may better reflect the innate infectious and plaque-forming capabilities of clinical samples and better reflect virus infectivity.

Indexed as

COVID-19FlavivirusHumansSARS-CoV-2ViremiaVirus Sheddingculture mediumdengueinfectious particlesinfectivity assessmentSARS-CoV-2

Identifiers

PMID34574767
PMCPMC8465741
OpenAlexW3201539356

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.