Evidence map›Paper›PMID 34573281›Full record

SynthesisGenes2021

Mitochondrial Genetic Heterogeneity in Leber's Hereditary Optic Neuropathy: Original Study with Meta-Analysis.

Rajan Kumar Jha, Chhavi Dawar, Qurratulain Hasan, Akhilesh Pujar, Gaurav Gupta, Venugopalan Y Vishnu, Ramesh Kekunnaya, Kumarasamy Thangaraj

Open access · goldAbstract readMeta-Analysis
In one paragraph

Synthesis in Genes, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 1 country.

Rajan Kumar JhaCSIR-Centre for Cellular and Molecular Biology (CSIR-CCMB), Hyderabad 500007, India.ORCID 0000-0002-7213-7001
Chhavi DawarCSIR-Centre for Cellular and Molecular Biology (CSIR-CCMB), Hyderabad 500007, India.
Qurratulain HasanKamineni Hospital, L.B. Nagar, Hyderabad 500068, India.
Akhilesh PujarChild Sight Institute, L V Prasad Eye Institute (LVPEI), Hyderabad 500034, India.
Gaurav GuptaGenome Foundation, Hyderabad 500034, India.ORCID 0000-0003-2944-9074
Venugopalan Y VishnuAll India Institute of Medical Sciences, New Delhi 110029, India.ORCID 0000-0002-3654-8137
Ramesh KekunnayaChild Sight Institute, L V Prasad Eye Institute (LVPEI), Hyderabad 500034, India.ORCID 0000-0001-5789-2300
Kumarasamy ThangarajCSIR-Centre for Cellular and Molecular Biology (CSIR-CCMB), Hyderabad 500007, India.
Centre for Cellular and Molecular Biology · INL V Prasad Eye Institute · INAll India Institute of Medical Sciences · INKamineni Hospitals · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Leber's hereditary optic neuropathy (LHON) is a mitochondrial disorder that causes loss of central vision. Three primary variants (m.3460G>A, m.11778G>A, and m.14484T>C) and about 16 secondary variants are responsible for LHON in the majority of the cases. We investigated the complete mitochondrial DNA (mtDNA) sequences of 189 LHON patients and found a total of 54 disease-linked pathogenic variants. The primary variants m.11778G>A and m.14484T>C were accountable for only 14.81% and 2.64% cases, respectively. Patients with these two variants also possessed additional disease-associated variants. Among 156 patients who lacked the three primary variants, 16.02% harboured other LHON-associated variants either alone or in combination with other disease-associated variants. Furthermore, we observed that none of the haplogroups were explicitly associated with LHON. We performed a meta-analysis of m.4216T>C and m.13708G>A and found a significant association of these two variants with the LHON phenotype. Based on this study, we recommend the use of complete mtDNA sequencing to diagnose LHON, as we found disease-associated variants throughout the mitochondrial genome.

Indexed as

Genetic HeterogeneityAdolescentAdultChildDNA, MitochondrialFemaleGene FrequencyHumansMaleOptic Atrophy, Hereditary, LeberDNA, MitochondrialDNA sequencinghaplogroupLHONmeta-analysismtDNAprimary variants

Identifiers

PMID34573281
PMCPMC8472268
OpenAlexW3195571234

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.