Evidence map›Paper›PMID 34572079›Full record

ArticleCells2021

Artificial Intelligence-Assisted Identification of Genetic Factors Predisposing High-Risk Individuals to Asymptomatic Heart Failure.

Ning-I Yang, Chi-Hsiao Yeh, Tsung-Hsien Tsai, Yi-Ju Chou, Paul Wei-Che Hsu, Chun-Hsien Li, Yun-Hsuan Chan, Li-Tang Kuo, Chun-Tai Mao, Yu-Chiau Shyu and 4 more

Open access · goldAbstract read
In one paragraph

Article in Cells, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
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  4. Review
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  8. Article
  9. Genetic susceptibility to severe COVID-19.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2023
    Review
  10. Article
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 1 country.

Ning-I YangDivision of Cardiology, Department of Internal Medicine, Chang Gung Memorial Hospital, Keelung 204, Taiwan.
Chi-Hsiao YehCommunity Medicine Research Center, Chang Gung Memorial Hospital, Keelung 204, Taiwan.ORCID 0000-0002-8850-4144
Tsung-Hsien TsaiAdvanced Tech BU, Acer Inc., New Taipei City 221, Taiwan.
Yi-Ju ChouInstitute of Molecular and Genomic Medicine, National Health Research Institute, Zhunan 350, Taiwan.
Paul Wei-Che HsuInstitute of Molecular and Genomic Medicine, National Health Research Institute, Zhunan 350, Taiwan.
Chun-Hsien LiAdvanced Tech BU, Acer Inc., New Taipei City 221, Taiwan.
Yun-Hsuan ChanAdvanced Tech BU, Acer Inc., New Taipei City 221, Taiwan.
Li-Tang KuoDivision of Cardiology, Department of Internal Medicine, Chang Gung Memorial Hospital, Keelung 204, Taiwan.
Chun-Tai MaoDivision of Cardiology, Department of Internal Medicine, Chang Gung Memorial Hospital, Keelung 204, Taiwan.ORCID 0000-0003-1138-5471
Yu-Chiau ShyuCommunity Medicine Research Center, Chang Gung Memorial Hospital, Keelung 204, Taiwan.ORCID 0000-0003-1747-2226
Ming-Jui HungDivision of Cardiology, Department of Internal Medicine, Chang Gung Memorial Hospital, Keelung 204, Taiwan.
Chi-Chun LaiCommunity Medicine Research Center, Chang Gung Memorial Hospital, Keelung 204, Taiwan.
Huey-Kang SytwuNational Institute of Infectious Diseases and Vaccinology, National Health Research Institutes, Zhunan 350, Taiwan.
Ting-Fen TsaiInstitute of Molecular and Genomic Medicine, National Health Research Institute, Zhunan 350, Taiwan.
Chang Gung University · TWNational Yang Ming Chiao Tung University · TWNational Health Research Institutes · TWChang Gung University of Science and Technology · TWAcer (Taiwan) · TW

Funding

Chang Gung Memorial Hospital CLRPG2L0051Chang Gung Memorial Hospital CMRPG2H000091-0093Chang Gung Memorial Hospital CMRPG2K0141-142Chang Gung Memorial Hospital CORPG2H0041-0043Chang Gung Memorial Hospital CRRPG2H0181-183Ministry of Science and Technology, Taiwan MOST 109-2320-B-010-043Ministry of Science and Technology, Taiwan MOST109-2320-B-182A-020Ministry of Science and Technology, Taiwan MOST 109-2634-F-010-003Ministry of Science and Technology, Taiwan MOST110-2314-B-182A-113-MY3
6 · The paper itself

Abstract

Heart failure (HF) is a global pandemic public health burden affecting one in five of the general population in their lifetime. For high-risk individuals, early detection and prediction of HF progression reduces hospitalizations, reduces mortality, improves the individual's quality of life, and reduces associated medical costs. In using an artificial intelligence (AI)-assisted genome-wide association study of a single nucleotide polymorphism (SNP) database from 117 asymptomatic high-risk individuals, we identified a SNP signature composed of 13 SNPs. These were annotated and mapped into six protein-coding genes (GAD2, APP, RASGEF1C, MACROD2, DMD, and DOCK1), a pseudogene (PGAM1P5), and various non-coding RNA genes (LINC01968, LINC00687, LOC105372209, LOC101928047, LOC105372208, and LOC105371356). The SNP signature was found to have a good performance when predicting HF progression, namely with an accuracy rate of 0.857 and an area under the curve of 0.912. Intriguingly, analysis of the protein connectivity map revealed that DMD, RASGEF1C, MACROD2, DOCK1, and PGAM1P5 appear to form a protein interaction network in the heart. This suggests that, together, they may contribute to the pathogenesis of HF. Our findings demonstrate that a combination of AI-assisted identifications of SNP signatures and clinical parameters are able to effectively identify asymptomatic high-risk subjects that are predisposed to HF.

Indexed as

Genetic Predisposition to DiseasePolymorphism, Single NucleotideAgedArtificial IntelligenceFemaleGenome-Wide Association StudyHeart Disease Risk FactorsHeart FailureHumansMaleMiddle Agedartificial intelligencegenetic factorsheart failuresingle nucleotide polymorphism

Identifiers

PMID34572079
PMCPMC8470162
OpenAlexW3200284658

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.