Evidence map›Paper›PMID 34570642›Full record

ArticleAntimicrobial agents and chemotherapy2021

A One-Health Genomic Investigation of Gentamicin Resistance in Salmonella from Human and Chicken Sources in Canada, 2014 to 2017.

Graham W Cox, E Jane Parmley, Brent P Avery, Rebecca J Irwin, Richard J Reid-Smith, Anne E Deckert, Rita L Finley, Danielle Daignault, David C Alexander, Vanessa Allen and 10 more

Open access · greenAbstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 15 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Nanopore sequencing in veterinary medicine: from concepts to clinical applications.Frontiers in cellular and infection microbiology · 2025
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 7 institutions in 1 country.

Graham W CoxDepartment of Medical Microbiology and Infectious Diseases, University of Manitoba, Winnipeg, Manitoba, Canada.ORCID 0000-0002-5443-9401
E Jane ParmleyCentre for Food-borne, Environmental and Zoonotic Infectious Diseases, Public Health Agency of Canadagrid.415368.d, Guelph, Ontario, Canada.
Brent P AveryCentre for Food-borne, Environmental and Zoonotic Infectious Diseases, Public Health Agency of Canadagrid.415368.d, Guelph, Ontario, Canada.
Rebecca J IrwinCentre for Food-borne, Environmental and Zoonotic Infectious Diseases, Public Health Agency of Canadagrid.415368.d, Guelph, Ontario, Canada.
Richard J Reid-SmithCentre for Food-borne, Environmental and Zoonotic Infectious Diseases, Public Health Agency of Canadagrid.415368.d, Guelph, Ontario, Canada.
Anne E DeckertCentre for Food-borne, Environmental and Zoonotic Infectious Diseases, Public Health Agency of Canadagrid.415368.d, Guelph, Ontario, Canada.
Rita L FinleyCentre for Food-borne, Environmental and Zoonotic Infectious Diseases, Public Health Agency of Canadagrid.415368.d, Guelph, Ontario, Canada.
Danielle DaignaultNational Microbiology Laboratory, Public Health Agency of Canadagrid.415368.d, St. Hyacinthe, Quebec, Canada.
David C AlexanderCadham Provincial Laboratory, Winnipeg, Manitoba, Canada.
Vanessa AllenPublic Health Ontariogrid.415400.4 Laboratories, Toronto, Ontario, Canada.
Sameh El BaileyHorizon Health Network, Saint John, New Brunswick, Canada.
Sadjia BekalLaboratoire de Santé Publique du Québec, Sainte-Anne-de-Bellevue, Quebec, Canada.
Linda ChuiAlberta Precision Laboratories-Provincial Laboratory for Public Health, Edmonton, Alberta, Canada.ORCID 0000-0003-0851-9803
Greg J GermanQueen Elizabeth Hospitalgrid.278859.9, Charlottetown, Prince Edward Island, Canada.
David HaldaneQueen Elizabeth II Health Sciences Centre, Halifax, Nova Scotia, Canada.
Linda HoangBritish Columbia Centre for Disease Control, Vancouver, British Columbia, Canada.
Jessica MinionRoy Romanow Provincial Laboratory, Regina, Saskatchewan, Canada.
George ZahariadisNewfoundland and Labrador Public Health and Microbiology Laboratory, St. John's, Newfoundland and Labrador, Canada.
Michael R MulveyDepartment of Medical Microbiology and Infectious Diseases, University of Manitoba, Winnipeg, Manitoba, Canada.
Amrita BharatDepartment of Medical Microbiology and Infectious Diseases, University of Manitoba, Winnipeg, Manitoba, Canada.ORCID 0000-0003-4171-9436
Public Health Agency of Canada · CABC Centre for Disease Control · CAHorizon Health Network · CAQueen Elizabeth II Health Sciences Centre · CASte. Anne's Hospital · CAToronto Public Health · CAUniversity of Alberta · CA

Funding

Gouvernement du Canada | Canadian Institutes of Health Research (CIHR) CFC-150770
6 · The paper itself

Abstract

We investigated whether the increased prevalence of gentamicin resistance in Salmonella from human infections was related to a similar increased prevalence in isolates from broiler chickens and whether this increase may have been due to coselection from use of lincomycin-spectinomycin in chickens on farms. Whole-genome sequencing was performed on gentamicin-resistant (Gen

Indexed as

One HealthSalmonella entericaAnimalsAnti-Bacterial AgentsCanadaChickensDrug Resistance, Multiple, BacterialGenomicsGentamicinsHumansSalmonellaAnti-Bacterial AgentsGentamicinsaminoglycosidesantimicrobial resistancegenomicsgentamicinpoultrywhole-genome sequencing

Identifiers

PMID34570642
PMCPMC8597779
OpenAlexW3204147579

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.