Evidence map›Paper›PMID 34570228›Full record

ArticleNucleic acids research2021

A dominant-negative SOX18 mutant disrupts multiple regulatory layers essential to transcription factor activity.

Alex J McCann, Jieqiong Lou, Mehdi Moustaqil, Matthew S Graus, Ailisa Blum, Frank Fontaine, Hui Liu, Winnie Luu, Paulina Rudolffi-Soto, Peter Koopman and 6 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
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  9. Infantile hemangioma: the common and enigmatic vascular tumor.The Journal of clinical investigation · 2024
    Review
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  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 2 countries.

Alex J McCannInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia.ORCID 0000-0002-2984-5782
Jieqiong LouSchool of Physics, Department of Biochemistry and Molecular Biology, Bio21, The University of Melbourne, Melbourne, VIC 3010, Australia.
Mehdi MoustaqilEMBL Australia Node in Single Molecule Science and School of Medical Sciences, The University of New South Wales, Sydney, NSW 1466, Australia.
Matthew S GrausThe David Richmond Laboratory for Cardio-Vascular Development: gene regulation and editing, The Centenary Institute, Newtown, Sydney, NSW 2006, Australia.
Ailisa BlumClem Jones Centre for Ageing Dementia Research, Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia.
Frank FontaineInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia.
Hui LiuJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, United States.
Winnie LuuThe David Richmond Laboratory for Cardio-Vascular Development: gene regulation and editing, The Centenary Institute, Newtown, Sydney, NSW 2006, Australia.
Paulina Rudolffi-SotoEMBL Australia Node in Single Molecule Science and School of Medical Sciences, The University of New South Wales, Sydney, NSW 1466, Australia.
Peter KoopmanInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia.
Emma SiereckiEMBL Australia Node in Single Molecule Science and School of Medical Sciences, The University of New South Wales, Sydney, NSW 1466, Australia.
Yann GambinEMBL Australia Node in Single Molecule Science and School of Medical Sciences, The University of New South Wales, Sydney, NSW 1466, Australia.
Frédéric A MeunierClem Jones Centre for Ageing Dementia Research, Queensland Brain Institute, The University of Queensland, Brisbane, QLD 4072, Australia.
Zhe LiuJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, VA 20147, United States.
Elizabeth HindeSchool of Physics, Department of Biochemistry and Molecular Biology, Bio21, The University of Melbourne, Melbourne, VIC 3010, Australia.
Mathias FrancoisInstitute for Molecular Bioscience, The University of Queensland, Brisbane, QLD 4072, Australia.
The University of Queensland · AUUNSW Sydney · AUCentenary Institute · AUHoward Hughes Medical Institute · USThe University of Melbourne · AUThe University of Sydney · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Few genetically dominant mutations involved in human disease have been fully explained at the molecular level. In cases where the mutant gene encodes a transcription factor, the dominant-negative mode of action of the mutant protein is particularly poorly understood. Here, we studied the genome-wide mechanism underlying a dominant-negative form of the SOX18 transcription factor (SOX18RaOp) responsible for both the classical mouse mutant Ragged Opossum and the human genetic disorder Hypotrichosis-lymphedema-telangiectasia-renal defect syndrome. Combining three single-molecule imaging assays in living cells together with genomics and proteomics analysis, we found that SOX18RaOp disrupts the system through an accumulation of molecular interferences which impair several functional properties of the wild-type SOX18 protein, including its target gene selection process. The dominant-negative effect is further amplified by poisoning the interactome of its wild-type counterpart, which perturbs regulatory nodes such as SOX7 and MEF2C. Our findings explain in unprecedented detail the multi-layered process that underpins the molecular aetiology of dominant-negative transcription factor function.

Indexed as

Transcription, GeneticAnimalsChlorocebus aethiopsCOS CellsDisease Models, AnimalGene Expression RegulationGene Regulatory NetworksGenes, ReporterGlomerulonephritisHeLa CellsHumansHuman Umbilical Vein Endothelial CellsHypotrichosisLuciferasesLymphedemaMEF2 Transcription FactorsLuciferasesMEF2C protein, humanMEF2 Transcription FactorsSOX18 protein, humanSOX7 protein, humanSOXF Transcription Factors

Identifiers

PMID34570228
PMCPMC8565327
OpenAlexW3204207425

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.