Evidence map›Paper›PMID 34568933›Full record

ArticleG3 (Bethesda, Md.)2021

Epistasis for head morphology in Drosophila melanogaster.

Ergi D Özsoy, Murat Yılmaz, Bahar Patlar, Güzin Emecen, Esra Durmaz, Michael M Magwire, Shanshan Zhou, Wen Huang, Robert R H Anholt, Trudy F C Mackay

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Ergi D ÖzsoyDepartment of Biology, Functional and Evolutionary Genetics Laboratory (FEGL), Science Faculty, Hacettepe University, 06800 Beytepe, Ankara, Turkey.
Murat YılmazDepartment of Biology, Functional and Evolutionary Genetics Laboratory (FEGL), Science Faculty, Hacettepe University, 06800 Beytepe, Ankara, Turkey.
Bahar PatlarDepartment of Biology, Functional and Evolutionary Genetics Laboratory (FEGL), Science Faculty, Hacettepe University, 06800 Beytepe, Ankara, Turkey.ORCID 0000-0002-0442-9061
Güzin EmecenDepartment of Biology, Functional and Evolutionary Genetics Laboratory (FEGL), Science Faculty, Hacettepe University, 06800 Beytepe, Ankara, Turkey.
Esra DurmazDepartment of Biology, Functional and Evolutionary Genetics Laboratory (FEGL), Science Faculty, Hacettepe University, 06800 Beytepe, Ankara, Turkey.ORCID 0000-0002-4345-2264
Michael M MagwireDepartment of Animal Science, Michigan State University, East Lansing, MI 48824, USA.
Shanshan ZhouDepartment of Animal Science, Michigan State University, East Lansing, MI 48824, USA.
Wen HuangDepartment of Animal Science, Michigan State University, East Lansing, MI 48824, USA.ORCID 0000-0001-6788-8364
Robert R H AnholtDepartment of Genetics, North Carolina State University, Raleigh, NC 27695-7614, USA.ORCID 0000-0001-7196-8324
Trudy F C MackayDepartment of Genetics, North Carolina State University, Raleigh, NC 27695-7614, USA.ORCID 0000-0002-2312-7245
Hacettepe University · TRMichigan State University · USNorth Carolina State University · US

Funding

QUANTITATIVE TRAIT LOCI IN DROSOPHILAR01GM045146 · NIGMS · NORTH CAROLINA STATE UNIVERSITY RALEIGH · PI ANHOLT, ROBERT R. H, MACKAY, TRUDY F. · 1991 to 2012
$5.1M
Reverse Engineering Quantitative Genetic VariationR01GM128974 · NIGMS · CLEMSON UNIVERSITY · PI ANHOLT, ROBERT R. H, MACKAY, TRUDY F. · 2018 to 2021
$1.9M
NIGMS NIH HHS R01 GM045146NIGMS NIH HHS R01 GM128974
6 · The paper itself

Abstract

Epistasis-gene-gene interaction-is common for mutations with large phenotypic effects in humans and model organisms. Epistasis impacts quantitative genetic models of speciation, response to natural and artificial selection, genetic mapping, and personalized medicine. However, the existence and magnitude of epistasis between alleles with small quantitative phenotypic effects are controversial and difficult to assess. Here, we use the Drosophila melanogaster Genetic Reference Panel of sequenced inbred lines to evaluate the magnitude of naturally occurring epistasis modifying the effects of mutations in jing and inv, two transcription factors that have subtle quantitative effects on head morphology as homozygotes. We find significant epistasis for both mutations and performed single marker genome-wide association analyses to map candidate modifier variants and loci affecting head morphology. A subset of these loci was significantly enriched for a known genetic interaction network, and mutations of the candidate epistatic modifier loci also affect head morphology.

Indexed as

Drosophila melanogasterEpistasis, GeneticAllelesAnimalsChromosome MappingGenome-Wide Association StudyDrosophila Genetic Reference Panelgenetic interaction networkgenome-wide association analysesmodifier loci

Identifiers

PMID34568933
PMCPMC8473977
OpenAlexW3195632287

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.