ArticleG3 (Bethesda, Md.)2021
Chromosome-scale assembly of wild barley accession "OUH602".
Article in G3 (Bethesda, Md.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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Who cites it
13 citing papers in PubMed.
- Nanopore sequencing reveals coordinated host and microbiome responses across barley genotypes.BMC biology · 2026Article
- Temporal Dynamics of Gene Expression and Metabolic Rewiring in Wild Barley (International journal of molecular sciences · 2025Article
- Discovery and Evolutionary Analysis of a Novel Genus of Endogenous Pararetroviruses with Long Terminal Repeats.Genome biology and evolution · 2025Article
- Genetic resources and pangenome analysis of barley.Breeding science · 2025Article
- High resolution mapping of a novel non-transgressive hybrid susceptibility locus in barley exploited by P. teres f. maculata.BMC plant biology · 2024Article
- The Evolution, Expression Patterns, and Domestication Selection Analysis of the Annexin Gene Family in the Barley Pan-Genome.International journal of molecular sciences · 2024Article
- Genome-wide characterization and evolution analysis of miniature inverted-repeat transposable elements in Barley (Frontiers in plant science · 2024Article
- BarleyExpDB: an integrative gene expression database for barley.BMC plant biology · 2023Article
- Genome-Wide Analysis ofInternational journal of molecular sciences · 2022Article
- BGFD: an integrated multi-omics database of barley gene families.BMC plant biology · 2022Article
- A lineage-specific Exo70 is required for receptor kinase-mediated immunity in barley.Science advances · 2022Article
- Article
- Chromosome-scale assembly of barley cv. 'Haruna Nijo' as a resource for barley genetics.DNA research : an international journal for rapid publication of reports on genes and genomes · 2022Article
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Authors and funding
6 authors.
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Abstract
Barley (Hordeum vulgare) was domesticated from its wild ancestral form ca. 10,000 years ago in the Fertile Crescent and is widely cultivated throughout the world, except for in tropical areas. The genome size of both cultivated barley and its conspecific wild ancestor is approximately 5 Gb. High-quality chromosome-level assemblies of 19 cultivated and one wild barley genotype were recently established by pan-genome analysis. Here, we release another equivalent short-read assembly of the wild barley accession "OUH602." A series of genetic and genomic resources were developed for this genotype in prior studies. Our assembly contains more than 4.4 Gb of sequence, with a scaffold N50 value of over 10 Mb. The haplotype shows high collinearity with the most recently updated barley reference genome, "Morex" V3, with some inversions. Gene projections based on "Morex" gene models revealed 46,807 protein-coding sequences and 43,375 protein-coding genes. Alignments to publicly available sequences of bacterial artificial chromosome (BAC) clones of "OUH602" confirm the high accuracy of the assembly. Since more loci of interest have been identified in "OUH602," the release of this assembly, with detailed genomic information, should accelerate gene identification and the utilization of this key wild barley accession.
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