Evidence map›Paper›PMID 34564276›Full record

ArticleInsects2021

Genome-Wide Association Study Reveals a New Quantitative Trait Locus in Rice Related to Resistance to Brown Planthopper

Longqing Shi, Meng Dong, Ling Lian, Junian Zhang, Yongsheng Zhu, Weilong Kong, Liangmiao Qiu, Dawei Liu, Zhenxing Xie, Zhixiong Zhan and 1 more

Abstract read
In one paragraph

Article in Insects, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Longqing ShiRice Research Institute, Fujian Academy of Agricultural Sciences, Cangshan, Fuzhou 350018, China.ORCID 0000-0003-2036-7558
Meng DongRice Research Institute, Fujian Academy of Agricultural Sciences, Cangshan, Fuzhou 350018, China.
Ling LianRice Research Institute, Fujian Academy of Agricultural Sciences, Cangshan, Fuzhou 350018, China.
Junian ZhangRice Research Institute, Fujian Academy of Agricultural Sciences, Cangshan, Fuzhou 350018, China.
Yongsheng ZhuRice Research Institute, Fujian Academy of Agricultural Sciences, Cangshan, Fuzhou 350018, China.
Weilong KongShenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Genome Analysis Laboratory of the Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China.ORCID 0000-0002-6066-0508
Liangmiao QiuInstitute of Plant Protection, Fujian Academy of Agricultural Sciences, Fuzhou 350013, China.ORCID 0000-0002-7679-7146
Dawei LiuRice Research Institute, Fujian Academy of Agricultural Sciences, Cangshan, Fuzhou 350018, China.
Zhenxing XieRice Research Institute, Fujian Academy of Agricultural Sciences, Cangshan, Fuzhou 350018, China.
Zhixiong ZhanRice Research Institute, Fujian Academy of Agricultural Sciences, Cangshan, Fuzhou 350018, China.
Zhaowei JiangRice Research Institute, Fujian Academy of Agricultural Sciences, Cangshan, Fuzhou 350018, China.

Funding

a sub-project of National Key R&D Program of China 2017YFD0100105special project of research institutes of basic research and public service, Fujian, China 2018R1021-4
6 · The paper itself

Abstract

The brown planthopper (BPH) is one of the main pests endangering rice yields. The development of rice varieties harboring resistance genes is the most economical and effective method of managing BPH. To identify new BPH resistance-related genes, a total of 123 rice varieties were assessed for resistance and durable resistance. Three varieties were immune, and nine were highly resistant to BPH. After whole-genome resequencing of all 123 varieties, 1,897,845 single nucleotide polymorphisms (SNPs) were identified. Linkage disequilibrium (LD) decay analysis showed that the average LD of the SNPs at 20 kb was 0.30 (r

Indexed as

durable resistanceGWASHost-plant resistanceresistance genesrice pest

Identifiers

PMID34564276
PMCPMC8469741

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.