Evidence map›Paper›PMID 34561485›Full record

ArticleScientific reports2021

Profiling extra cellular matrix associated proteome of human fetal nucleus pulposus in search for regenerative targets.

Shanmuganathan Rajasekaran, Chitra Thangavel, Niek Djuric, Muthurajan Raveendran, Dilip Chand Raja Soundararajan, Sharon Miracle Nayagam, Monica Steffi Matchado, K S Sri Vijay Anand, Krishna Venkateshwaran

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
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  3. Exploring the role of Serpins as a potential molecular target in intervertebral disc degeneration.European spine journal : official publication of the European Spine Society, the European Spinal Deformity Society, and the European Section of the Cervical Spine Research Society · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Shanmuganathan RajasekaranDepartment of Spine Surgery, Ganga Hospital, 313, Mettuppalayam Road, Coimbatore, 641043, India. rajasekaran.orth@gmail.com.
Chitra ThangavelGanga Research Centre, No 91, Mettuppalayam Road, Coimbatore, 641030, India.
Niek DjuricGanga Research Centre, No 91, Mettuppalayam Road, Coimbatore, 641030, India.
Muthurajan RaveendranDepartment of Plant Biotechnology, Tamil Nadu Agricultural University, Coimbatore, 641003, India.
Dilip Chand Raja SoundararajanDepartment of Spine Surgery, Ganga Hospital, 313, Mettuppalayam Road, Coimbatore, 641043, India.
Sharon Miracle NayagamGanga Research Centre, No 91, Mettuppalayam Road, Coimbatore, 641030, India.
Monica Steffi MatchadoGanga Research Centre, No 91, Mettuppalayam Road, Coimbatore, 641030, India.
K S Sri Vijay AnandDepartment of Spine Surgery, Ganga Hospital, 313, Mettuppalayam Road, Coimbatore, 641043, India.
Krishna VenkateshwaranDepartment of Clinical Pathology, Microlab, Coimbatore, India.
Ganga Hospital · INLeiden University Medical Center · NLTamil Nadu Agricultural University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Degeneration of the intervertebral disc is associated with a decrease in extra-cellular matrix (ECM) content due to an imbalance in anabolic and catabolic signaling. Our previous study profiled the core matrisome of fetal NP's and identified various proteins with anabolic potential for regenerative therapies. This study aims to complement those results by exploring ECM regulators, associated proteins and secreted factors of the fetal nucleus pulposus (NP). Proteomic data of 9 fetal, 7 healthy adults (age 22-79), and 11 degenerated NP's was analyzed. Based on the selection criteria, a total of 45 proteins were identified, of which 14 were uniquely expressed or upregulated in fetus compared to adult NP's. Pathway analysis with these proteins revealed a significant upregulation of one pathway and two biological processes, in which 12 proteins were involved. Prolyl 4 hydroxylase (P4HA) 1 and 2, Procollagen-lysine, 2-oxoglutarate 5-dioxygenase (PLOD) 1, and Heat shock protein 47 (SERPINH1) were involved in 'collagen biosynthesis' pathway. In addition, PLOD 1, SERPINH1, Annexin A1 and A4, CD109 and Galectin 3 (LGALS3) were all involved in biological process of 'tissue development'. Furthermore Annexin A1, A4 and A5, LGALS-3 and SERPINF1 were featured in 'negative regulation of cell death'. In conclusion, additionally to core ECM proteome, this study reveals ECM regulators and ECM affiliated proteins of interest to study for regenerative therapies, and their potential should be validated in future mechanistic experiments.

Indexed as

ProteomicsRegenerative MedicineAdultAgedExtracellular MatrixExtracellular Matrix ProteinsFemaleFetusHumansIntervertebral DiscIntervertebral Disc DegenerationMaleMiddle AgedNucleus PulposusProteomeYoung AdultExtracellular Matrix ProteinsProteome

Identifiers

PMID34561485
PMCPMC8463528
OpenAlexW3201326993

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.