Evidence map›Paper›PMID 34559646›Full record

ArticleIEEE transactions on medical imaging2022

A Nonparametric Approach for Estimating Three-Dimensional Fiber Orientation Distribution Functions (ODFs) in Fibrous Materials.

Adam Rauff, Lucas H Timmins, Ross T Whitaker, Jeffrey A Weiss

Abstract read
In one paragraph

Article in IEEE transactions on medical imaging, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Matrix anisotropy promotes angiogenesis in a density-dependent manner.American journal of physiology. Heart and circulatory physiology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Adam Rauff
Lucas H Timmins
Ross T Whitaker
Jeffrey A Weiss

Funding

Finite Elements For Biomechanics And BiophysicsR01GM083925 · NIGMS · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI GERARD A. ATESHIAN, JEFFREY A. WEISS · 2008 to 2026
$7.6M
Neovessel Guidance in AngiogenesisR01HL131856 · NHLBI · UNIVERSITY OF UTAH · PI HOYING, JAMES B, WEISS, JEFFREY A. · 2017 to 2020
$1.8M
Lab-to-User Training and Dissemination for the FEBio Software SuiteU24EB029007 · NIBIB · UNIVERSITY OF UTAH · PI WEISS, JEFFREY A. · 2019 to 2023
$1.3M
Regulation of Angiogenic Neovessel Invasion Across TissuesF31HL154781 · NHLBI · UNIVERSITY OF UTAH · PI RAUFF, ADAM · 2020 to 2021
$68k
NHLBI NIH HHS F31 HL154781NHLBI NIH HHS R01 HL131856NIBIB NIH HHS U24 EB029007NIGMS NIH HHS R01 GM083925
6 · The paper itself

Abstract

Many biological tissues contain an underlying fibrous microstructure that is optimized to suit a physiological function. The fiber architecture dictates physical characteristics such as stiffness, diffusivity, and electrical conduction. Abnormal deviations of fiber architecture are often associated with disease. Thus, it is useful to characterize fiber network organization from image data in order to better understand pathological mechanisms. We devised a method to quantify distributions of fiber orientations based on the Fourier transform and the Qball algorithm from diffusion MRI. The Fourier transform was used to decompose images into directional components, while the Qball algorithm efficiently converted the directional data from the frequency domain to the orientation domain. The representation in the orientation domain does not require any particular functional representation, and thus the method is nonparametric. The algorithm was verified to demonstrate its reliability and used on datasets from microscopy to show its applicability. This method increases the ability to extract information of microstructural fiber organization from experimental data that will enhance our understanding of structure-function relationships and enable accurate representation of material anisotropy in biological tissues.

Indexed as

BrainDiffusion Magnetic Resonance ImagingAlgorithmsAnisotropyImage Processing, Computer-AssistedReproducibility of Results

Identifiers

PMID34559646
PMCPMC9052546

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.