Evidence map›Paper›PMID 34554397›Full record

ArticleJournal of molecular neuroscience : MN2022

Analysis of the HEXA, HEXB, ARSA, and SMPD1 Genes in 68 Iranian Patients.

Rezvan Abtahi, Parvaneh Karimzadeh, Alireza Rezayi, Shadab Salehpour, Diba Akbarzadeh, Seyed Hassan Tonekaboni, Reza Zolfaghari Emameh, Massoud Houshmand

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Article in Journal of molecular neuroscience : MN, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Rezvan AbtahiDepartment of Medical Genetics, National Institute for Genetic Engineering and Biotechnology (NIGEB), 14965/161, Tehran, Iran.
Parvaneh KarimzadehPediatric Neurology Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Alireza RezayiDepartment of Pediatrics Neurology, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Shadab SalehpourDepartment of Pediatric Endocrinology , Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Diba AkbarzadehStudent's Research Committee, School of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Seyed Hassan TonekaboniPediatric Neurology Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran.
Reza Zolfaghari EmamehDepartment of Energy and Environmental Biotechnology, National Institute of Genetic Engineering and Biotechnology (NIGEB), 14965/161, Tehran, Iran.
Massoud HoushmandDepartment of Medical Genetics, National Institute for Genetic Engineering and Biotechnology (NIGEB), 14965/161, Tehran, Iran. housh62@yahoo.com.ORCID http://orcid.org/0000-0002-2198-223X
Shahid Beheshti University of Medical Sciences · IRNational Institute of Genetic Engineering and Biotechnology · IRHawler Medical University · IQ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lysosomal storage diseases (LSDs) are known as genetic disorders with an overall prevalence of 1 per 7700 live births. Sphingolipidosis, which is a subgroup of LSDs, is resulted from mutations in the coding genes of specific enzymes of sphingolipid hydrolases. The current study aimed to provide additional knowledge on the genotype of sphingolipidoses disease among Iranian patients affected by the disease. In this research, we studied 68 unrelated Iranian patients diagnosed with one kind of sphingolipidoses from 2014 to 2019. Thereafter, genomic DNA was isolated from their peripheral blood leukocytes samples in EDTA in terms of the manufacturer's protocol. All the coding exons and exon-intron boundaries of the related genes were sequenced and then analyzed using the NCBI database. Finally, they were reviewed using some databases such as the Human Gene Mutation Database (HGMD) and ClinVar ( https://www.ncbi.nlm.nih.gov/clinva ). By studying 22 MLD patients, 18 different variations of the ARSA gene were found, one of which was new including, named as c.472 T > G p. (Cys158Gly). Out of 15 Sandhoff disease (SD) patients, 11 different variations of the HEXB gene were found. Correspondingly, the c.1083-2delA was not reported earlier. By investigating 21 Iranian patients with Tay-Sachs disease (TSD), one new variant was found as c.622delG. The study of 10 Niemann-Pick disease A/B (NPDA/B (patients has led to the identification of 9 different SMPD1 gene variations, among which 3 variations were novel mutations. The results of the present study can be expanded to the genotypic spectrum of Iranian patients with MLD, SD, TSD, and NPD diseases and also used to innovate more effective methods for the detection of genetic carriers as well as diagnosing and counseling of Iranian patients affected with these disorders.

Indexed as

Tay-Sachs Diseasebeta-Hexosaminidase alpha Chainbeta-Hexosaminidase beta ChainExonsGenotypeHeterozygoteHumansIranMutationSphingomyelin Phosphodiesterasebeta-Hexosaminidase alpha Chainbeta-Hexosaminidase beta ChainHEXA protein, humanHEXB protein, humanSMPD1 protein, humanSphingomyelin PhosphodiesteraseIranian patientsMolecular studyNew variantSphingolipidosis

Identifiers

PMID34554397
OpenAlexW3201300518

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.