Evidence map›Paper›PMID 34553588›Full record

ArticleACS chemical biology2021

Deorphanizing Caspase-3 and Caspase-9 Substrates In and Out of Apoptosis with Deep Substrate Profiling.

Luam E Araya, Ishankumar V Soni, Jeanne A Hardy, Olivier Julien

Open access · greenAbstract read
In one paragraph

Article in ACS chemical biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers.

0numbers the graph read from it
0cells of the map it votes in
71citing papers in PubMed
8.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

71 citing papers in PubMed, 139 citations in OpenAlex.

  1. Review
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  14. [Research progress in the role of caspaseZhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2025
    Review
  15. Article
  16. Article
  17. In Vitro and In Silico Cytotoxic Activity of Isocordoin fromInternational journal of molecular sciences · 2025
    Article
  18. Article
  19. Methylglyoxal Formation-Metabolic Routes and Consequences.Antioxidants (Basel, Switzerland) · 2025
    Review
  20. Review

11 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Luam E ArayaDepartment of Biochemistry, University of Alberta, Edmonton T6G 2H7, Alberta, Canada.ORCID 0000-0003-1991-3443
Ishankumar V SoniDepartment of Chemistry, University of Massachusetts, Amherst 01003, Massachusetts, United States.
Jeanne A HardyDepartment of Chemistry, University of Massachusetts, Amherst 01003, Massachusetts, United States.ORCID 0000-0002-3406-7997
Olivier JulienDepartment of Biochemistry, University of Alberta, Edmonton T6G 2H7, Alberta, Canada.ORCID 0000-0001-7068-7299
University of Alberta · CAUniversity of Massachusetts Amherst · US

Funding

CHEMISTRY-BIOLOGY INTERFACE PREDOCTORAL TRAINING GRANTST32GM008515 · NIGMS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI THOMPSON, LYNMARIE K. · 1995 to 2020
$4.3M
Control of Executioner Caspases with an allosteric switch - SupplementR01GM080532 · NIGMS · UNIVERSITY OF MASSACHUSETTS AMHERST · PI HARDY, JEANNE ANN · 2008 to 2022
$3.8M
NIGMS NIH HHS R01 GM080532NIGMS NIH HHS T32 GM008515
6 · The paper itself

Abstract

Caspases are a family of enzymes that regulate biological processes such as inflammation and programmed cell death, through proteolysis. For example, in the intrinsic pathway of apoptosis, cell death signaling involves cytochrome

Indexed as

ApoptosisCaspase 3Caspase 9Escherichia coliGene Expression Regulation, EnzymologicHumansJurkat CellsPlasmidsProteinsSubstrate SpecificityCaspase 3Caspase 9Proteins

Identifiers

PMID34553588
PMCPMC9116730
OpenAlexW3200167435

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.