Evidence map›Paper›PMID 34551714›Full record

ArticleBMC microbiology2021

Carbon starvation of Pseudomonas aeruginosa biofilms selects for dispersal insensitive mutants.

Harikrishnan A S Nair, Sujatha Subramoni, Wee Han Poh, Nabilah Taqiah Binte Hasnuddin, Martin Tay, Michael Givskov, Tim Tolker-Nielsen, Staffan Kjelleberg, Diane McDougald, Scott A Rice

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

  1. Evolutionary adaptations ofMicrobiology spectrum · 2026
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  7. Impact of Nutrient Starvation on Biofilm Formation inAntibiotics (Basel, Switzerland) · 2024
    Article
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  10. A Library of Promoter-Applied and environmental microbiology · 2023
    Article
  11. Frontiers in microbiology · 2023
    Article
  12. Article
  13. Nutrient Sensing and Biofilm Modulation: The Example of L-arginine inInternational journal of molecular sciences · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 4 countries.

Harikrishnan A S Nair *The Singapore Centre for Environmental Life Sciences Engineering, Singapore, Singapore.
Sujatha Subramoni *The Singapore Centre for Environmental Life Sciences Engineering, Singapore, Singapore.
Wee Han PohThe Singapore Centre for Environmental Life Sciences Engineering, Singapore, Singapore.
Nabilah Taqiah Binte HasnuddinThe Singapore Centre for Environmental Life Sciences Engineering, Singapore, Singapore.
Martin TayThe Singapore Centre for Environmental Life Sciences Engineering, Singapore, Singapore.
Michael GivskovThe Singapore Centre for Environmental Life Sciences Engineering, Singapore, Singapore.
Tim Tolker-NielsenCosterton Biofilm Center, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
Staffan KjellebergThe Singapore Centre for Environmental Life Sciences Engineering, Singapore, Singapore.
Diane McDougaldThe Singapore Centre for Environmental Life Sciences Engineering, Singapore, Singapore. Diane.McDougald@uts.edu.au.ORCID 0000-0001-5827-8441
Scott A RiceThe Singapore Centre for Environmental Life Sciences Engineering, Singapore, Singapore. rscott@ntu.edu.sg.
Singapore Centre for Environmental Life Sciences Engineering · SGUniversity of Copenhagen · DKUniversity of Technology Sydney · AUEppendorf (Germany) · DENanyang Technological University · SGPublic Utilities Board · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundBiofilms disperse in response to specific environmental cues, such as reduced oxygen concentration, changes in nutrient concentration and exposure to nitric oxide. Interestingly, biofilms do not completely disperse under these conditions, which is generally attributed to physiological heterogeneity of the biofilm. However, our results suggest that genetic heterogeneity also plays an important role in the non-dispersing population of P. aeruginosa in biofilms after nutrient starvation.

resultsIn this study, 12.2% of the biofilm failed to disperse after 4 d of continuous starvation-induced dispersal. Cells were recovered from the dispersal phase as well as the remaining biofilm. For 96 h starved biofilms, rugose small colony variants (RSCV) were found to be present in the biofilm, but were not observed in the dispersal effluent. In contrast, wild type and small colony variants (SCV) were found in high numbers in the dispersal phase. Genome sequencing of these variants showed that most had single nucleotide mutations in genes associated with biofilm formation, e.g. in wspF, pilT, fha1 and aguR. Complementation of those mutations restored starvation-induced dispersal from the biofilms. Because c-di-GMP is linked to biofilm formation and dispersal, we introduced a c-di-GMP reporter into the wild-type P. aeruginosa and monitored green fluorescent protein (GFP) expression before and after starvation-induced dispersal. Post dispersal, the microcolonies were smaller and significantly brighter in GFP intensity, suggesting the relative concentration of c-di-GMP per cell within the microcolonies was also increased. Furthermore, only the RSCV showed increased c-di-GMP, while wild type and SCV were no different from the parental strain.

conclusionsThis suggests that while starvation can induce dispersal from the biofilm, it also results in strong selection for mutants that overproduce c-di-GMP and that fail to disperse in response to the dispersal cue, starvation.

Indexed as

BiofilmsMutationBacterial ProteinsCarbonGene Expression Regulation, BacterialNutrientsPseudomonas aeruginosaBacterial ProteinsCarbonNutrientsBiofilm developmentBioreporterC-di-GMPDispersalImage-based quantificationMorphotypic variantsPseudomonas aeruginosaStarvation

Identifiers

PMID34551714
PMCPMC8459498
OpenAlexW3199024880

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.