Evidence map›Paper›PMID 34551291›Full record

ArticleCell reports2021

ATF3 promotes the serine synthesis pathway and tumor growth under dietary serine restriction.

Xingyao Li, Daniel Gracilla, Lun Cai, Mingyi Zhang, Xiaolin Yu, Xiaoguang Chen, Junran Zhang, Xiaochun Long, Han-Fei Ding, Chunhong Yan

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 93 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Xingyao LiGeorgia Cancer Center, Augusta University, Augusta, GA 30912, USA.
Daniel GracillaGeorgia Cancer Center, Augusta University, Augusta, GA 30912, USA.
Lun CaiGeorgia Cancer Center, Augusta University, Augusta, GA 30912, USA.
Mingyi ZhangGeorgia Cancer Center, Augusta University, Augusta, GA 30912, USA; Institute of Materia Medica, Peking Union Medical College, Beijing 100050, China.
Xiaolin YuGeorgia Cancer Center, Augusta University, Augusta, GA 30912, USA.
Xiaoguang ChenInstitute of Materia Medica, Peking Union Medical College, Beijing 100050, China.
Junran ZhangDepartment of Radiation Oncology, Ohio State University James Comprehensive Cancer Center and College of Medicine, Columbus, OH 43210, USA.
Xiaochun LongVascular Biology Center, Medical College of Georgia, Augusta University, Augusta, GA 30912, USA.
Han-Fei DingGeorgia Cancer Center, Augusta University, Augusta, GA 30912, USA; Department of Pathology, Medical College of Georgia, Augusta University, Augusta, GA 30912, USA.
Chunhong YanGeorgia Cancer Center, Augusta University, Augusta, GA 30912, USA; Department of Biochemistry and Molecular Biology, Medical College of Georgia, Augusta University, Augusta, GA 30912, USA. Electronic address: cyan@augusta.edu.
Augusta University Health · USAugusta University · USChinese Academy of Medical Sciences & Peking Union Medical College · CNThe Ohio State University Comprehensive Cancer Center – Arthur G. James Cancer Hospital and Richard J. Solove Research Institute · US

Funding

Novel Role of MAPK14 in Regulation of VSMC Contractile PhenotypeR01HL122686 · NHLBI · AUGUSTA UNIVERSITY · PI LONG, XIAOCHUN · 2014 to 2022
$4.0M
RNA epigenetic regulation of cancer metabolismR01CA190429 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI HAN-FEI DING · 2014 to 2026
$3.7M
Function and Regulation of TSPAN2 in Vascular DiseaseR01HL139794 · NHLBI · AUGUSTA UNIVERSITY · PI LONG, XIAOCHUN · 2019 to 2023
$2.7M
ATF3 Regulation of Histone Acetylation in Genome MaintenanceR01CA240966 · NCI · AUGUSTA UNIVERSITY · PI YAN, CHUNHONG · 2020 to 2025
$1.7M
Linking nucleotide and amino acid metabolism to cholesterol synthesis by MYCNR01CA236890 · NCI · UNIVERSITY OF ALABAMA AT BIRMINGHAM · PI DING, HAN-FEI · 2020 to 2024
$1.7M
The Role of ATF3 in the DNA Damage ResponseR01CA139107 · NCI · AUGUSTA UNIVERSITY · PI YAN, CHUNHONG · 2010 to 2015
$1.2M
NCI NIH HHS R01 CA139107NCI NIH HHS R01 CA190429NCI NIH HHS R01 CA236890NCI NIH HHS R01 CA240966NHLBI NIH HHS R01 HL122686NHLBI NIH HHS R01 HL139794
6 · The paper itself

Abstract

The serine synthesis pathway (SSP) involving metabolic enzymes phosphoglycerate dehydrogenase (PHGDH), phosphoserine aminotransferase 1 (PSAT1), and phosphoserine phosphatase (PSPH) drives intracellular serine biosynthesis and is indispensable for cancer cells to grow in serine-limiting environments. However, how SSP is regulated is not well understood. Here, we report that activating transcription factor 3 (ATF3) is crucial for transcriptional activation of SSP upon serine deprivation. ATF3 is rapidly induced by serine deprivation via a mechanism dependent on ATF4, which in turn binds to ATF4 and increases the stability of this master regulator of SSP. ATF3 also binds to the enhancers/promoters of PHGDH, PSAT1, and PSPH and recruits p300 to promote expression of these SSP genes. As a result, loss of ATF3 expression impairs serine biosynthesis and the growth of cancer cells in the serine-deprived medium or in mice fed with a serine/glycine-free diet. Interestingly, ATF3 expression positively correlates with PHGDH expression in a subset of TCGA cancer samples.

Indexed as

Activating Transcription Factor 3Activating Transcription Factor 4AnimalsBiosynthetic PathwaysCell Line, TumorGene Expression Regulation, NeoplasticHumansMaleMiceMice, NudeNeoplasmsp300-CBP Transcription FactorsPhosphoglycerate DehydrogenasePhosphoric Monoester HydrolasesPromoter Regions, GeneticProtein BindingActivating Transcription Factor 3Activating Transcription Factor 4ATF3 protein, humanATF4 protein, humanp300-CBP Transcription FactorsPhosphoglycerate DehydrogenasePhosphoric Monoester Hydrolasesphosphoserine aminotransferasephosphoserine phosphataseSerineTransaminasesATF3ATF4p300PHGDHPSAT1PSPHserine biosynthesisserine deprivationserine metabolismserine synthesis pathway

Identifiers

PMID34551291
PMCPMC8491098
OpenAlexW3199501069

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.