Evidence map›Paper›PMID 34549979›Full record

ArticleJournal of virology2021

Multiplexed Simian Immunodeficiency Virus-Specific Paired RNA-Guided Cas9 Nickases Inactivate Proviral DNA.

Lisa M Smith, Jason T Ladner, Vida L Hodara, Laura M Parodi, R Alan Harris, Jessica E Callery, Zhao Lai, Yi Zou, Muthuswamy Raveedran, Jeffrey Rogers and 1 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 1 country.

Lisa M SmithHost-Pathogen Interactions Program and Southwest National Primate Research Center, Texas Biomedical Research Institutegrid.250889.e, San Antonio, Texas, USA.
Jason T LadnerThe Pathogen and Microbiome Institute, Northern Arizona University, Flagstaff, Arizona, USA.
Vida L HodaraHost-Pathogen Interactions Program and Southwest National Primate Research Center, Texas Biomedical Research Institutegrid.250889.e, San Antonio, Texas, USA.
Laura M ParodiHost-Pathogen Interactions Program and Southwest National Primate Research Center, Texas Biomedical Research Institutegrid.250889.e, San Antonio, Texas, USA.
R Alan HarrisHuman Genome Sequencing Center, Baylor College of Medicinegrid.39382.33, Houston, Texas, USA.
Jessica E CalleryHost-Pathogen Interactions Program and Southwest National Primate Research Center, Texas Biomedical Research Institutegrid.250889.e, San Antonio, Texas, USA.
Zhao LaiDepartment of Molecular Medicine, UT Health San Antonio, San Antonio, Texas, USA.
Yi ZouGreehey Children's Cancer Research Institute, UT Health San Antonio, San Antonio, Texas, USA.
Muthuswamy RaveedranHuman Genome Sequencing Center, Baylor College of Medicinegrid.39382.33, Houston, Texas, USA.
Jeffrey RogersHuman Genome Sequencing Center, Baylor College of Medicinegrid.39382.33, Houston, Texas, USA.
Luis D GiavedoniHost-Pathogen Interactions Program and Southwest National Primate Research Center, Texas Biomedical Research Institutegrid.250889.e, San Antonio, Texas, USA.ORCID 0000-0001-5244-7187
Texas Biomedical Research Institute · USBaylor College of Medicine · USNorthern Arizona University · USThe University of Texas Health Science Center at Houston · USThe University of Texas Health Science Center at San Antonio · US

Funding

The Southwest National Primate Research Center Supplement- Infrastructure improvements of ABSL2 holding areasP51OD011133 · OD · TEXAS BIOMEDICAL RESEARCH INSTITUTE · PI Larry S. Schlesinger · 2012 to 2026
$129.7M
Institute for Integration of Medicine & Science: A Partnership to Improve HealthUL1TR001120 · NCATS · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI CLARK, ROBERT A, HARGREAVES, KENNETH M · 2013 to 2017
$16.5M
NCATS NIH HHS UL1 TR001120NIH HHS P51 OD011133ODCDC CDC HHS P51 OD011133
6 · The paper itself

Abstract

Human and simian immunodeficiency virus (HIV and SIV) infections establish lifelong reservoirs of cells harboring an integrated proviral genome. Genome editing CRISPR-associated Cas9 nucleases, combined with SIV-specific guiding RNA (gRNA) molecules, inactivate integrated provirus DNA

Indexed as

DNAAnimalsCRISPR-Cas SystemsDeoxyribonuclease IEndonucleasesGene EditingHEK293 CellsHumansMacaca mulattaMutagenesisPlasmidsProvirusesRNA, Guide, CRISPR-Cas SystemsSimian Immunodeficiency VirusDeoxyribonuclease IDNAEndonucleasesRNA, Guide, CRISPR-Cas SystemsCRISPR/Cas9genome editingnickaseoff-target mutationSIV

Identifiers

PMID34549979
PMCPMC8577357
OpenAlexW3200573316

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.